RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PPP6R2O75170 966 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 E2F6O75461 281 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ARHGEF25Q86VW2 580 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 TAGAPQ8N103 731 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ZFYVE28Q9HCC9 887 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 SPTLC3Q9NUV7 552 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ASNSD1Q9NWL6 643 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ADAM22Q9P0K1 906 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 HMGCS2P54868 508 aa11.77□□□□□ -0.52
TRIM41-209ENST00000515834 WASHC5Q12768 1159 aa11.77□□□□□ -0.52
TRIM41-209ENST00000515834 TADA2BQ86TJ2 420 aa11.77□□□□□ -0.52
TRIM41-209ENST00000515834 TRIM45Q9H8W5 580 aaPredicted RBP11.77□□□□□ -0.52
TRIM41-209ENST00000515834 FBXL5Q9UKA1 691 aa11.77□□□□□ -0.52
TRIM41-209ENST00000515834 PADI6Q6TGC4 694 aa11.77□□□□□ -0.52
TRIM41-209ENST00000515834 CCHCR1Q8TD31 782 aa11.77□□□□□ -0.52
TRIM41-209ENST00000515834 TJP3O95049 919 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.53
TRIM41-209ENST00000515834 GCLMP48507 274 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 GTF2H3Q13889 308 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 MORC4Q8TE76 937 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 SEPT8Q92599 483 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 OSBP2Q969R2 916 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 DCUN1D1Q96GG9 259 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 TEX12Q9BXU0 123 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 HEG1Q9ULI3 1381 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 RSPH10BP0C881 870 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 TMEM62Q0P6H9 643 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 ANKRD40Q6AI12 368 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 SERPING1P05155 500 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 CENPUQ71F23 418 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 MCPH1Q8NEM0 835 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 ACAD9Q9H845 621 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 TMEM63CQ9P1W3 806 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.77□□□□□ -0.53
TRIM41-209ENST00000515834 SCINQ9Y6U3 715 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 PLXNC1O60486 1568 aa11.77□□□□□ -0.53
TRIM41-209ENST00000515834 CYP21A2P08686 494 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 KITP10721 976 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 L3MBTL1Q9Y468 752 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 ZNF235Q14590 738 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 SDE2Q6IQ49 451 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 NHEJ1Q9H9Q4 299 aaPredicted RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 HACL1Q9UJ83 578 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 IQANK1A0A1B0GTG1 560 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 ZBTB5O15062 677 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 STAT3P40763 770 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 RASSF3Q86WH2 238 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 MICALL2Q8IY33 904 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 TTC8Q8TAM2 541 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 THOC1Q96FV9 657 aaKnown RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 EPAS1Q99814 870 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 MAGEB5Q9BZ81 275 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 VPS11Q9H270 941 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 MID2Q9UJV3 735 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 CAPN15O75808 1086 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 HLA-DPA1P20036 260 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 PRDX5P30044 214 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 PRAMEP78395 509 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 SLC39A14Q15043 492 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 ANKS3Q6ZW76 656 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 BCAS4Q8TDM0 211 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 DNAJC7Q99615 494 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 MRPL4Q9BYD3 311 aaKnown RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 DYNC1LI2O43237 492 aaPredicted RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 DNAJC8O75937 253 aaPredicted RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 ACSL3O95573 720 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 MTMR2Q13614 643 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 SYTL3Q4VX76 610 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 PDIK1LQ8N165 341 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 HIPK4Q8NE63 616 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 DPF3Q92784 378 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 CD209Q9NNX6 404 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 PRR23AA6NEV1 266 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 POTEMA6NI47 508 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
TRIM41-209ENST00000515834 PSMC5P62195 406 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 OR6P1Q8NGX9 317 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 C2orf40Q9H1Z8 148 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
TRIM41-209ENST00000515834 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 FAM133BQ5BKY9 247 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 SLC44A5Q8NCS7 719 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 LSG1Q9H089 658 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 KIF17Q9P2E2 1029 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 PCDHA13Q9Y5I0 950 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 CCDC195A0A1B0GUA6 201 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 ASB14A6NK59 587 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 IKBKBO14920 756 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 MB21D1Q8N884 522 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 TTC17Q96AE7 1141 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms