RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 NVLO15381 856 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ECE2O60344 883 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 HNRNPCL1O60812 293 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 FGGP02679 453 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 H2AFZP0C0S5 128 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 SLC5A1P13866 664 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ALDH1B1P30837 517 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 VHLP40337 213 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 RFC5P40937 340 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PTDSS1P48651 473 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PLTPP55058 493 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 MTFR1Q15390 333 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 TXNRD1Q16881 649 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ALKBH5Q6P6C2 394 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ZDHHC24Q6UX98 284 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 H2AFVQ71UI9 128 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PROCA1Q8NCQ7 364 aaPredicted RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ZNF333Q96JL9 665 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 MAGEB18Q96M61 343 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 TRIM31Q9BZY9 425 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 CARD9Q9H257 536 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 GANQ9H2C0 597 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PCMTD2Q9NV79 361 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 LARSQ9P2J5 1176 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 TRIM33Q9UPN9 1127 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 USP20Q9Y2K6 914 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 THRAP3Q9Y2W1 955 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 FAM205AQ6ZU69 1335 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PITPNM2Q9BZ72 1349 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 MAGEA13PA6NCF6 341 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 RIPK2O43353 540 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 GFPT2O94808 682 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 AFPP02771 609 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PYGBP11216 843 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 FGFR2P21802 821 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PRKCIP41743 596 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 OCRLQ01968 901 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 MAPK7Q13164 816 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 TRMT10CQ7L0Y3 403 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 JAMLQ86YT9 394 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 FAM13CQ8NE31 585 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 IQCGQ9H095 443 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 RANBP17Q9H2T7 1088 aaKnown RBP13.83□□□□□ -0.2
SMAD1-215ENST00000515385 ATXN10Q9UBB4 475 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 TMCO1Q9UM00 188 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 NENFQ9UMX5 172 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PCDHA6Q9UN73 950 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PHF24Q9UPV7 400 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 PCDHA8Q9Y5H6 950 aa13.83□□□□□ -0.2
SMAD1-215ENST00000515385 MROH5Q6ZUA9 1318 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 TMEM120BA0PK00 339 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 SMIM23A6NLE4 172 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 TRAFD1O14545 582 aaPredicted RBP13.82□□□□□ -0.2
SMAD1-215ENST00000515385 ECEL1O95672 775 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 PTK2Q05397 1052 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 IRF2BP2Q7Z5L9 587 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 VSIG1Q86XK7 387 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 TRIM59Q8IWR1 403 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 MYOCDQ8IZQ8 938 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 EPS8L3Q8TE67 593 aaKnown RBP13.82□□□□□ -0.2
SMAD1-215ENST00000515385 OPTNQ96CV9 577 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 LZTS2Q9BRK4 669 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
SMAD1-215ENST00000515385 ZMYND8Q9ULU4 1186 aaPredicted RBP13.82□□□□□ -0.2
SMAD1-215ENST00000515385 AXIN2Q9Y2T1 843 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 DUOX1Q9NRD9 1551 aa13.82□□□□□ -0.2
SMAD1-215ENST00000515385 DCTN3O75935 186 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 CHRNA3P32297 505 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 YARSP54577 528 aaKnown RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 ARID5AQ03989 594 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 RASGRF1Q13972 1273 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 GSTA3Q16772 222 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 RNF220Q5VTB9 566 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 DPY19L2Q6NUT2 758 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 ARHGEF18Q6ZSZ5 1173 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 ZNF571Q7Z3V5 609 aaPredicted RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 LCA5Q86VQ0 697 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 FBXO25Q8TCJ0 367 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 LZICQ8WZA0 190 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 PTPRN2Q92932 1015 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 ARHGEF2Q92974 986 aaKnown RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 RMDN2Q96LZ7 410 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 GBP5Q96PP8 586 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 SEMA4AQ9H3S1 761 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 PLCH1Q4KWH8 1693 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 MYH1P12882 1939 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 MAPK13O15264 365 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 EPS15P42566 896 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 POLGP54098 1239 aaPredicted RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 RASA3Q14644 834 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 KPNB1Q14974 876 aaKnown RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms