RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SPATA31C1P0DKV0 1188 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 CMA1P23946 247 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 NPEPPSP55786 919 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 TMEM62Q0P6H9 643 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 SF3A1Q15459 793 aaKnown RBP9.27□□□□□ -0.93
CCL28-204ENST00000514421 IL17AQ16552 155 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 PLEKHG4Q58EX7 1191 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 XKR9Q5GH70 373 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 KRT79Q5XKE5 535 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 CATSPER3Q86XQ3 398 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 ELOA2Q8IYF1 753 aaPredicted RBP9.27□□□□□ -0.93
CCL28-204ENST00000514421 LINC01465Q8N7H1 131 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 IGSF22Q8N9C0 903 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 USP38Q8NB14 1042 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 PHOSPHO2Q8TCD6 241 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 MAP7D2Q96T17 732 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 SH2D3AQ9BRG2 576 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 CXXC1Q9P0U4 656 aaPredicted RBP9.27□□□□□ -0.93
CCL28-204ENST00000514421 TRPV2Q9Y5S1 764 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 CLIC4Q9Y696 253 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 SLC4A7Q9Y6M7 1214 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 DOCK5Q9H7D0 1870 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 KDM3AQ9Y4C1 1321 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 A0A087WWV3 80 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 TMEM150BA6NC51 233 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 ZBBXA8MT70 800 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 MED24O75448 989 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 BAIAP3O94812 1187 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 CCT6AP40227 531 aaKnown RBP9.26□□□□□ -0.93
CCL28-204ENST00000514421 RFC5P40937 340 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 CRYBB1P53674 252 aaPredicted RBP9.26□□□□□ -0.93
CCL28-204ENST00000514421 CCDC173Q0VFZ6 552 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
CCL28-204ENST00000514421 LPIN1Q14693 890 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 FBXO47Q5MNV8 452 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 ODR4Q5SWX8 454 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 HAUS3Q68CZ6 603 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 PLA2G4FQ68DD2 849 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 LRRC71Q8N4P6 559 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 ZNF579Q8NAF0 562 aaKnown RBP9.26□□□□□ -0.93
CCL28-204ENST00000514421 SLC7A3Q8WY07 619 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
CCL28-204ENST00000514421 APBB2Q92870 758 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 GOLPH3LQ9H4A5 285 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 DHX33Q9H6R0 707 aaKnown RBP9.26□□□□□ -0.93
CCL28-204ENST00000514421 SUCLA2Q9P2R7 463 aaPredicted RBP9.26□□□□□ -0.93
CCL28-204ENST00000514421 AKT3Q9Y243 479 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 HPSEQ9Y251 543 aa9.26□□□□□ -0.93
CCL28-204ENST00000514421 VWA3AA6NCI4 1184 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 ENPP3O14638 875 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 ASAP2O43150 1006 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 GAS2O43903 313 aaKnown RBP9.25□□□□□ -0.93
CCL28-204ENST00000514421 CUTAO60888 179 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 GPR32O75388 356 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 DGAT1O75907 488 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 VTNP04004 478 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 CCDC192P0DO97 292 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 GHRP10912 638 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 KCNJ6P48051 423 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 ME1P48163 572 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 CLCN3P51790 818 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 POLGP54098 1239 aaPredicted RBP9.25□□□□□ -0.93
CCL28-204ENST00000514421 NLRP11P59045 1033 aaKnown RBP9.25□□□□□ -0.93
CCL28-204ENST00000514421 SMAD3P84022 425 aaKnown RBP9.25□□□□□ -0.93
CCL28-204ENST00000514421 STK38Q15208 465 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 HS1BP3Q53T59 392 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 TSHZ1Q6ZSZ6 1077 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 KCTD17Q8N5Z5 321 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 PIGOQ8TEQ8 1089 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 TCP11Q8WWU5 503 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 AK8Q96MA6 479 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 CCDC43Q96MW1 224 aaKnown RBP9.25□□□□□ -0.93
CCL28-204ENST00000514421 TIGD1Q96MW7 591 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 IFIH1Q9BYX4 1025 aaKnown RBP9.25□□□□□ -0.93
CCL28-204ENST00000514421 OSBPL7Q9BZF2 842 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 TNMDQ9H2S6 317 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 ADAMTS10Q9H324 1103 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 DBR1Q9UK59 544 aaKnown RBP9.25□□□□□ -0.93
CCL28-204ENST00000514421 KIAA1024Q9UPX6 916 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 DNM3Q9UQ16 869 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 GINS2Q9Y248 185 aa9.25□□□□□ -0.93
CCL28-204ENST00000514421 SOX1O00570 391 aaPredicted RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 GPR182O15218 404 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 SLC26A4O43511 780 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 RPS6KA5O75582 802 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 ATP2A2P16615 1042 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 EIF4BP23588 611 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 CDC25AP30304 524 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 LONP1P36776 959 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 UBA7P41226 1012 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 RARRES1P49788 294 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 FXR1P51114 621 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCL28-204ENST00000514421 GPC3P51654 580 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 CEBPZQ03701 1054 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 NFX1Q12986 1120 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 ECM1Q16610 540 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 KIZQ2M2Z5 673 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 TCTN1Q2MV58 587 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 RESP18Q5W5W9 173 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms