RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 SPC24Q8NBT2 197 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 AFG1LQ8WV93 481 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 NAP1L5Q96NT1 182 aaPredicted RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 KCTD10Q9H3F6 313 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 DHX33Q9H6R0 707 aaKnown RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 RTN4Q9NQC3 1192 aaKnown RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 KMT5AQ9NQR1 393 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 TMEM150BA6NC51 233 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 DYNC1LI2O43237 492 aaPredicted RBP17.61■□□□□ 0.41
NUP54-214ENST00000514307 TBC1D8O95759 1140 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 COPB1P53618 953 aaKnown RBP17.61■□□□□ 0.41
NUP54-214ENST00000514307 GTF2BQ00403 316 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 TBC1D8BQ0IIM8 1120 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 PLCB4Q15147 1175 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 KRT31Q15323 416 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 NFIL3Q16649 462 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 ZCWPW2Q504Y3 356 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 IRF2BP1Q8IU81 584 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 SH2D3AQ9BRG2 576 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 STRA6Q9BX79 667 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 GBP3Q9H0R5 595 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 RNF186Q9NXI6 227 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 TRPC6Q9Y210 931 aa17.61■□□□□ 0.41
NUP54-214ENST00000514307 K7ENM7 598 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 MAGEB2O15479 319 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 ASAP2O43150 1006 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 KPNA6O60684 536 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 TRPA1O75762 1119 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 ZNF865P0CJ78 1059 aaPredicted RBP17.6■□□□□ 0.41
NUP54-214ENST00000514307 CYP2C19P33261 490 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 NCKAP1LP55160 1127 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 HSP90AA2PQ14568 343 aaPredicted RBP17.6■□□□□ 0.41
NUP54-214ENST00000514307 EMC2Q15006 297 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 PRAMEF19Q5SWL8 479 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 RETREG2Q8NC44 543 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 GLIS3Q8NEA6 775 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 TUBGCP2Q9BSJ2 902 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 VPS16Q9H269 839 aa17.6■□□□□ 0.41
NUP54-214ENST00000514307 METTL14Q9HCE5 456 aaKnown RBP17.6■□□□□ 0.41
NUP54-214ENST00000514307 A6NJR5 290 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 LGALS2P05162 132 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 NPTX2P47972 431 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 VEGFBP49765 207 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 FLT3LGP49771 235 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 CPT1AP50416 773 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 CASP5P51878 434 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 PPP2R3AQ06190 1150 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 MXD4Q14582 209 aaPredicted RBP17.59■□□□□ 0.41
NUP54-214ENST00000514307 CCDC40Q4G0X9 1142 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 ZC2HC1CQ53FD0 456 aaPredicted RBP17.59■□□□□ 0.41
NUP54-214ENST00000514307 FKBP15Q5T1M5 1219 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 VSTM4Q8IW00 320 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 CNOT6LQ96LI5 555 aaKnown RBP17.59■□□□□ 0.41
NUP54-214ENST00000514307 FIZ1Q96SL8 496 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 NOC4LQ9BVI4 516 aaKnown RBP17.59■□□□□ 0.41
NUP54-214ENST00000514307 FLRT1Q9NZU1 646 aa17.59■□□□□ 0.41
NUP54-214ENST00000514307 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.59■□□□□ 0.41
NUP54-214ENST00000514307 PHLPP2Q6ZVD8 1323 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.58■□□□□ 0.4
NUP54-214ENST00000514307 RRN3P2A6NIE6 340 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 H3BRB1 525 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 SLC16A4O15374 487 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 NRDCO43847 1150 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 IGHA2P01877 340 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 TPM1P09493 284 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 HOXD8P13378 290 aaPredicted RBP17.58■□□□□ 0.4
NUP54-214ENST00000514307 AKR1A1P14550 325 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 MARK3P27448 753 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 ARL2P36404 184 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 CCL14Q16627 93 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 TMEM63BQ5T3F8 832 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 SPECC1LQ69YQ0 1117 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 CCDC186Q7Z3E2 898 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 TMC6Q7Z403 805 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 FRMD5Q7Z6J6 570 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 PPFIBP1Q86W92 1011 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 TMEM174Q8WUU8 243 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 FGFBP2Q9BYJ0 223 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 POLR3FQ9H1D9 316 aaPredicted RBP17.58■□□□□ 0.4
NUP54-214ENST00000514307 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
NUP54-214ENST00000514307 SPC25Q9HBM1 224 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 GPRC5CQ9NQ84 441 aa17.58■□□□□ 0.4
NUP54-214ENST00000514307 GNEQ9Y223 722 aaKnown RBP17.58■□□□□ 0.4
NUP54-214ENST00000514307 COL1A2P08123 1366 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 PES1O00541 588 aaKnown RBP17.57■□□□□ 0.4
NUP54-214ENST00000514307 PPP1R37O75864 691 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 NR3C1P04150 777 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 NR2F2P24468 414 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 TMOD1P28289 359 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 HOXD13P35453 343 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 PSMC2P35998 433 aaKnown RBP17.57■□□□□ 0.4
NUP54-214ENST00000514307 NAMPTP43490 491 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 EFNA5P52803 228 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 MARSP56192 900 aaKnown RBP17.57■□□□□ 0.4
NUP54-214ENST00000514307 UBXN1Q04323 297 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 STRN3Q13033 797 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 APTXQ7Z2E3 356 aaKnown RBP17.57■□□□□ 0.4
NUP54-214ENST00000514307 SLC9A9Q8IVB4 645 aa17.57■□□□□ 0.4
NUP54-214ENST00000514307 ZC3H3Q8IXZ2 948 aaKnown RBP17.57■□□□□ 0.4
NUP54-214ENST00000514307 DEPTORQ8TB45 409 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms