RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CELF4Q9BZC1 486 aaKnown RBP9.15□□□□□ -0.94
NEDD4-210ENST00000513957 TMEM60Q9H2L4 133 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 CYP26B1Q9NR63 512 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 PCDHB6Q9Y5E3 794 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 CDY2AQ9Y6F7 541 aa9.15□□□□□ -0.94
NEDD4-210ENST00000513957 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.95
NEDD4-210ENST00000513957 VPS37CA5D8V6 355 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 MAFO75444 373 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 DGAT1O75907 488 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 SLITRK3O94933 977 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 STBD1O95210 358 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 CHRNA1P02708 482 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 CTSHP09668 335 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 ATP2A2P16615 1042 aaKnown RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 TECP42680 631 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 CRYBB1P53674 252 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 POLGP54098 1239 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 PCBP1Q15365 356 aaKnown RBP eCLIP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 MTERF2Q49AM1 385 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 EFCAB12Q6NXP0 572 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 ZNF410Q86VK4 478 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 METTL13Q8N6R0 699 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 TRAPPC12Q8WVT3 735 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 TCP11Q8WWU5 503 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 DYDC2Q96IM9 177 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 CEP170P1Q96L14 293 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 CCDC43Q96MW1 224 aaKnown RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 CEP89Q96ST8 783 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 INO80BQ9C086 356 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 FAM49AQ9H0Q0 323 aaPredicted RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 DHX33Q9H6R0 707 aaKnown RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 DBR1Q9UK59 544 aaKnown RBP9.14□□□□□ -0.95
NEDD4-210ENST00000513957 AKT3Q9Y243 479 aa9.14□□□□□ -0.95
NEDD4-210ENST00000513957 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 GPR182O15218 404 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 ASAP2O43150 1006 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 AMHP03971 560 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 RARRES1P49788 294 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 WDR5P61964 334 aaKnown RBP9.13□□□□□ -0.95
NEDD4-210ENST00000513957 CYP4A11Q02928 519 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 POU5F1BQ06416 359 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 PAK2Q13177 524 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 BECN1Q14457 450 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 MXD4Q14582 209 aaPredicted RBP9.13□□□□□ -0.95
NEDD4-210ENST00000513957 LPIN1Q14693 890 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 KRT79Q5XKE5 535 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 ATL3Q6DD88 541 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 CATSPER3Q86XQ3 398 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 TPH2Q8IWU9 490 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 PLPP6Q8IY26 295 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 DBF4BQ8NFT6 615 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 PSPC1Q8WXF1 523 aaKnown RBP9.13□□□□□ -0.95
NEDD4-210ENST00000513957 RSPH1Q8WYR4 309 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 GLMNQ92990 594 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 NT5C3AQ9H0P0 336 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 RGL1Q9NZL6 768 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 CXXC1Q9P0U4 656 aaPredicted RBP9.13□□□□□ -0.95
NEDD4-210ENST00000513957 WRAP73Q9P2S5 460 aaPredicted RBP9.13□□□□□ -0.95
NEDD4-210ENST00000513957 LRWD1Q9UFC0 647 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 MSRAQ9UJ68 235 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 MTMR6Q9Y217 621 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 PCDHA11Q9Y5I1 949 aa9.13□□□□□ -0.95
NEDD4-210ENST00000513957 LAMA2P24043 3122 aaKnown RBP9.13□□□□□ -0.95
NEDD4-210ENST00000513957 GPR32O75388 356 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 RPS6KA5O75582 802 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 SPATA31C1P0DKV0 1188 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 GHRP10912 638 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 DNAJB2P25686 324 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 LONP1P36776 959 aaKnown RBP9.12□□□□□ -0.95
NEDD4-210ENST00000513957 GPC3P51654 580 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 CLCN3P51790 818 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 RESTQ13127 1097 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
NEDD4-210ENST00000513957 EMC2Q15006 297 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 XKR9Q5GH70 373 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 HYIQ5T013 277 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 ZNF697Q5TEC3 545 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 SND1Q7KZF4 910 aaKnown RBP eCLIP9.12□□□□□ -0.95
NEDD4-210ENST00000513957 HERC6Q8IVU3 1022 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 MCPH1Q8NEM0 835 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 MTRQ99707 1265 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 NFKBIZQ9BYH8 718 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 SUGCTQ9HAC7 445 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 ATP6V0A4Q9HBG4 840 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 GDPD2Q9HCC8 539 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 C1orf112Q9NSG2 853 aa9.12□□□□□ -0.95
NEDD4-210ENST00000513957 FNDC1Q4ZHG4 1894 aaPredicted RBP9.12□□□□□ -0.95
NEDD4-210ENST00000513957 SZT2Q5T011 3432 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 SOX1O00570 391 aaPredicted RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 MED24O75448 989 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 GJB5O95377 273 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 DARSP14868 501 aaKnown RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 SFPQP23246 707 aaKnown RBP eCLIP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 EIF4BP23588 611 aaKnown RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 CCT6AP40227 531 aaKnown RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 NLRP11P59045 1033 aaKnown RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 TFDP1Q14186 410 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 KIZQ2M2Z5 673 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms