RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.91	■□□□□ 0.62	7e-7	■■□□□ 13.2
MATR3-222	ENST00000513678	TNFRSF25	Q93038	417 aa		18.91	■□□□□ 0.62
MATR3-222	ENST00000513678	C1QTNF1	Q9BXJ1	281 aa		18.91	■□□□□ 0.62
MATR3-222	ENST00000513678	GJB4	Q9NTQ9	266 aa		18.91	■□□□□ 0.62
MATR3-222	ENST00000513678	CLDND1	Q9NY35	253 aa		18.91	■□□□□ 0.62
MATR3-222	ENST00000513678	DARS	P14868	501 aa	Known RBP	18.9	■□□□□ 0.62
MATR3-222	ENST00000513678	PPP2R5C	Q13362	524 aa		18.9	■□□□□ 0.62
MATR3-222	ENST00000513678	FAM102B	Q5T8I3	360 aa		18.9	■□□□□ 0.62
MATR3-222	ENST00000513678	OXER1	Q8TDS5	423 aa		18.9	■□□□□ 0.62
MATR3-222	ENST00000513678	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.9	■□□□□ 0.62
MATR3-222	ENST00000513678	VAV3	Q9UKW4	847 aa		18.9	■□□□□ 0.62
MATR3-222	ENST00000513678	TBKBP1	A7MCY6	615 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	COL9A1	P20849	921 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	IRS1	P35568	1242 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	DLX2	Q07687	328 aa	Predicted RBP	18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	DRP2	Q13474	957 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	PIK3AP1	Q6ZUJ8	805 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	POF1B	Q8WVV4	589 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	EPHX3	Q9H6B9	360 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	ATP6V0A4	Q9HBG4	840 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	BRMS1	Q9HCU9	246 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	RNF19A	Q9NV58	838 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	HCST	Q9UBK5	93 aa		18.89	■□□□□ 0.61
MATR3-222	ENST00000513678	C5orf42	Q9H799	3197 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	TMEM150B	A6NC51	233 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	TBX10	O75333	385 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	FGFR1	P11362	822 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	IBSP	P21815	317 aa	Predicted RBP	18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.88	■□□□□ 0.61	2e-10	■■■□□ 15.1
MATR3-222	ENST00000513678	KRT2	P35908	639 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	UBE3A	Q05086	875 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	MTERF2	Q49AM1	385 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	GJD3	Q8N144	294 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	ZNF668	Q96K58	619 aa	Predicted RBP	18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	TMEM117	Q9H0C3	514 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	LIMCH1	Q9UPQ0	1083 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	PLXNA4	Q9HCM2	1894 aa		18.88	■□□□□ 0.61
MATR3-222	ENST00000513678	EML1	O00423	815 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	DTNB	O60941	627 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	MAF	O75444	373 aa	Predicted RBP	18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	CSPG5	O95196	566 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	PSMC5	P62195	406 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	CDC42EP1	Q00587	391 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	ST3GAL1	Q11201	340 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	C8orf34	Q49A92	452 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	EARS2	Q5JPH6	523 aa	Known RBP	18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	ANO5	Q75V66	913 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	ADGRD2	Q7Z7M1	963 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	HAS1	Q92839	578 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	PPP2R3C	Q969Q6	453 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	CWH43	Q9H720	699 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	AAAS	Q9NRG9	546 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	TYW1	Q9NV66	732 aa	Known RBP	18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	FAM50B	Q9Y247	325 aa		18.87	■□□□□ 0.61
MATR3-222	ENST00000513678	LINC01565	O15544	149 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	HOXA2	O43364	376 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	CCNT1	O60563	726 aa	Known RBP	18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	DKC1	O60832	514 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	ZP2	Q05996	745 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	NR5A1	Q13285	461 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	ADAM15	Q13444	863 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	CSPP1	Q1MSJ5	1256 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	EP400NL	Q6ZTU2	488 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	ZNF598	Q86UK7	904 aa	Known RBP	18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	ECHDC2	Q86YB7	292 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	SLFN12	Q8IYM2	578 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	COLGALT1	Q8NBJ5	622 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	CASD1	Q96PB1	797 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	SH2D3A	Q9BRG2	576 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	LLPH	Q9BRT6	129 aa	Known RBP	18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	C11orf16	Q9NQ32	467 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	PRKAG3	Q9UGI9	489 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	PPME1	Q9Y570	386 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678	PCDHB12	Q9Y5F1	795 aa		18.86	■□□□□ 0.61
MATR3-222	ENST00000513678		A0A0U1RQF3	1178 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	PI4K2B	G5E9Z4	385 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	JAK2	O60674	1132 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	FGF18	O76093	207 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	ZSCAN20	P17040	1043 aa	Predicted RBP	18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	ATF7	P17544	494 aa	Predicted RBP	18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	LAG3	P18627	525 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	QARS	P47897	775 aa	Known RBP	18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	SPIRE1	Q08AE8	756 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	SMAD2	Q15796	467 aa	Known RBP	18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	LRRC55	Q6ZSA7	311 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	ZNF410	Q86VK4	478 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	LRRC43	Q8N309	656 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	EFHB	Q8N7U6	833 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	NLRP7	Q8WX94	980 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	MSLNL	Q96KJ4	702 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	SCLT1	Q96NL6	688 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	KIF2C	Q99661	725 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	PCDHGC5	Q9Y5F6	944 aa		18.85	■□□□□ 0.61
MATR3-222	ENST00000513678	FAM205C	A6NFA0	338 aa		18.84	■□□□□ 0.61
MATR3-222	ENST00000513678	C19orf67	A6NJJ6	358 aa		18.84	■□□□□ 0.61
MATR3-222	ENST00000513678	DDX11L8	A8MPP1	907 aa		18.84	■□□□□ 0.61
MATR3-222	ENST00000513678	MBTPS2	O43462	519 aa		18.84	■□□□□ 0.61
MATR3-222	ENST00000513678	P4HB	P07237	508 aa	Known RBP	18.84	■□□□□ 0.61
MATR3-222	ENST00000513678	FGFR4	P22455	802 aa		18.84	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms