RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
RNF4-218ENST00000513284 HBP1O60381 514 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 LILRB3O75022 631 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 LETM2Q2VYF4 491 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 SPECC1Q5M775 1068 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 ODR4Q5SWX8 454 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 CABP7Q86V35 215 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 HELQQ8TDG4 1101 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 IGDCC4Q8TDY8 1250 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 SPZ1Q9BXG8 430 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 ADAMTS10Q9H324 1103 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 TBC1D17Q9HA65 648 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 NFASCO94856 1347 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 C2orf16Q68DN1 1984 aa12.78□□□□□ -0.36
RNF4-218ENST00000513284 A0A0U1RQF3 1178 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 HOXA2O43364 376 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 LRRN2O75325 713 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 C22orf31O95567 290 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 TGM1P22735 817 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 CA8P35219 290 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 AAMPQ13685 434 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 PHLDB3Q6NSJ2 640 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 CCDC149Q6ZUS6 474 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 DDX53Q86TM3 631 aaKnown RBP12.77□□□□□ -0.37
RNF4-218ENST00000513284 CCDC60Q8IWA6 550 aaPredicted RBP12.77□□□□□ -0.37
RNF4-218ENST00000513284 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.37
RNF4-218ENST00000513284 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
RNF4-218ENST00000513284 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
RNF4-218ENST00000513284 AGO4Q9HCK5 861 aaKnown RBP12.77□□□□□ -0.37
RNF4-218ENST00000513284 DHX15O43143 795 aaKnown RBP12.76□□□□□ -0.37
RNF4-218ENST00000513284 B4GALT3O60512 393 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 GALTP07902 379 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 ALDH7A1P49419 539 aaKnown RBP12.76□□□□□ -0.37
RNF4-218ENST00000513284 SLC26A2P50443 739 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 CLCN4P51793 760 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 POLGP54098 1239 aaPredicted RBP12.76□□□□□ -0.37
RNF4-218ENST00000513284 ANTXR2P58335 489 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 ABI1Q8IZP0 508 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 LINC01465Q8N7H1 131 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 RNF169Q8NCN4 708 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 GPR152Q8TDT2 470 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
RNF4-218ENST00000513284 TMEM169Q96HH4 297 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 IGSF21Q96ID5 467 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 MYADMQ96S97 322 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 MYL10Q9BUA6 226 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 RALYQ9UKM9 306 aaKnown RBP12.76□□□□□ -0.37
RNF4-218ENST00000513284 SIT1Q9Y3P8 196 aa12.76□□□□□ -0.37
RNF4-218ENST00000513284 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 DCDC2BA2VCK2 349 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 MEIS1O00470 390 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 PLEKHA8P1O95397 391 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 COL1A2P08123 1366 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 CYP21A2P08686 494 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 CNPP09543 421 aaKnown RBP12.75□□□□□ -0.37
RNF4-218ENST00000513284 FGFR4P22455 802 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 NLRP11P59045 1033 aaKnown RBP12.75□□□□□ -0.37
RNF4-218ENST00000513284 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
RNF4-218ENST00000513284 PTPN14Q15678 1187 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 ST3GAL2Q16842 350 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 VARS2Q5ST30 1063 aaKnown RBP12.75□□□□□ -0.37
RNF4-218ENST00000513284 SWSAP1Q6NVH7 229 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 ST13P5Q8NFI4 369 aaPredicted RBP12.75□□□□□ -0.37
RNF4-218ENST00000513284 ZNF668Q96K58 619 aaPredicted RBP12.75□□□□□ -0.37
RNF4-218ENST00000513284 SDF4Q9BRK5 362 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
RNF4-218ENST00000513284 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
RNF4-218ENST00000513284 SRFP11831 508 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
RNF4-218ENST00000513284 EIF4BP23588 611 aaKnown RBP12.74□□□□□ -0.37
RNF4-218ENST00000513284 CLCN3P51790 818 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 GIT2Q14161 759 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 PDXDC2PQ6P474 469 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 C15orf39Q6ZRI6 1047 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 CATIPQ7Z7H3 387 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 METTL13Q8N6R0 699 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 PGBD1Q96JS3 809 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 MAP3K14Q99558 947 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 WDR6Q9NNW5 1121 aaKnown RBP12.74□□□□□ -0.37
RNF4-218ENST00000513284 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 EPS15L1Q9UBC2 864 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 MAFBQ9Y5Q3 323 aaPredicted RBP12.74□□□□□ -0.37
RNF4-218ENST00000513284 BAHCC1Q9P281 2608 aa12.74□□□□□ -0.37
RNF4-218ENST00000513284 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
RNF4-218ENST00000513284 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
RNF4-218ENST00000513284 COL9A3Q14050 684 aaPredicted RBP12.73□□□□□ -0.37
RNF4-218ENST00000513284 BMS1Q14692 1282 aaKnown RBP12.73□□□□□ -0.37
RNF4-218ENST00000513284 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms