RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 ZNF720Q7Z2F6 126 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 TLK2Q86UE8 772 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 IRF2BP1Q8IU81 584 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 MYOCDQ8IZQ8 938 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 MYCT1Q8N699 235 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 MCPH1Q8NEM0 835 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 GLG1Q92896 1179 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 ERO1AQ96HE7 468 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 PDLIM2Q96JY6 352 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 UPF3AQ9H1J1 476 aaKnown RBP10.34□□□□□ -0.75
DHFR-206ENST00000513048 RNPEPQ9H4A4 650 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 ST6GALNAC4Q9H4F1 302 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
DHFR-206ENST00000513048 SAMSN1Q9NSI8 373 aaKnown RBP10.34□□□□□ -0.75
DHFR-206ENST00000513048 SIP14410 1827 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 EIF3DO15371 548 aaKnown RBP eCLIP10.33□□□□□ -0.76
DHFR-206ENST00000513048 HBP1O60381 514 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 DUSP11O75319 330 aaKnown RBP10.33□□□□□ -0.76
DHFR-206ENST00000513048 PRPF6O94906 941 aaKnown RBP10.33□□□□□ -0.76
DHFR-206ENST00000513048 ZNF286BP0CG31 522 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 AKR1A1P14550 325 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 HOXD10P28358 340 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 ARL2P36404 184 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 NCKAP1LP55160 1127 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 KCNA1Q09470 495 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 ODR4Q5SWX8 454 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 FAM102BQ5T8I3 360 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 ZC3H3Q8IXZ2 948 aaKnown RBP10.33□□□□□ -0.76
DHFR-206ENST00000513048 LINC01465Q8N7H1 131 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 ASAP3Q8TDY4 903 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 KAT2BQ92831 832 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 KIFAP3Q92845 792 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 KCNN1Q92952 543 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 DRC1Q96MC2 740 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 CCDC43Q96MW1 224 aaKnown RBP10.33□□□□□ -0.76
DHFR-206ENST00000513048 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 NTPCRQ9BSD7 190 aaKnown RBP10.33□□□□□ -0.76
DHFR-206ENST00000513048 MRPL44Q9H9J2 332 aaKnown RBP10.33□□□□□ -0.76
DHFR-206ENST00000513048 ERAP1Q9NZ08 941 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 ZMYM2Q9UBW7 1377 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 UBE4BO95155 1302 aa10.33□□□□□ -0.76
DHFR-206ENST00000513048 COL1A2P08123 1366 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 BICDL2A1A5D9 508 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 MYADML2A6NDP7 307 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 H3BRB1 525 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 HAS3O00219 553 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 SEPT4O43236 478 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 TGFB1I1O43294 461 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 ADCY3O60266 1144 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 C22orf31O95567 290 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 ADCY5O95622 1261 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 F2P00734 622 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 CCND3P30281 292 aaPredicted RBP10.32□□□□□ -0.76
DHFR-206ENST00000513048 NPTX2P47972 431 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 ZNF75DP51815 510 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 POLGP54098 1239 aaPredicted RBP10.32□□□□□ -0.76
DHFR-206ENST00000513048 GJA9P57773 515 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 C1QTNF8P60827 252 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 MAP2K1Q02750 393 aaPredicted RBP10.32□□□□□ -0.76
DHFR-206ENST00000513048 LRRC63Q05C16 580 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 DGKDQ16760 1214 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 ZC2HC1CQ53FD0 456 aaPredicted RBP10.32□□□□□ -0.76
DHFR-206ENST00000513048 ZNF484Q5JVG2 852 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 LRRC55Q6ZSA7 311 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 FAM178BQ8IXR5 827 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 DNAJC5GQ8N7S2 189 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 TRAPPC12Q8WVT3 735 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 TMEM143Q96AN5 459 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 POLR3FQ9H1D9 316 aaPredicted RBP10.32□□□□□ -0.76
DHFR-206ENST00000513048 IKZF4Q9H2S9 585 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 TUT1Q9H6E5 874 aaKnown RBP10.32□□□□□ -0.76
DHFR-206ENST00000513048 C17orf75Q9HAS0 396 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 LARSQ9P2J5 1176 aaKnown RBP10.32□□□□□ -0.76
DHFR-206ENST00000513048 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 ADGRA3Q8IWK6 1321 aa10.32□□□□□ -0.76
DHFR-206ENST00000513048 ADAMTS4O75173 837 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 GCNT3O95395 438 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 HMGCRP04035 888 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 INSRRP14616 1297 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 GLRA2P23416 452 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 PRMT2P55345 433 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 PEX3P56589 373 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 GTF2BQ00403 316 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 FANCCQ00597 558 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 BEX3Q00994 111 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 DRP2Q13474 957 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 KNOP1Q1ED39 458 aaKnown RBP10.31□□□□□ -0.76
DHFR-206ENST00000513048 MARCH8Q5T0T0 291 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 IER5LQ5T953 404 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 KSR1Q8IVT5 923 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 NELFCDQ8IXH7 590 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 TMEM161BQ8NDZ6 487 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 NOC3LQ8WTT2 800 aaKnown RBP10.31□□□□□ -0.76
DHFR-206ENST00000513048 ZBTB10Q96DT7 871 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 SRRTQ9BXP5 876 aaKnown RBP10.31□□□□□ -0.76
DHFR-206ENST00000513048 AP5M1Q9H0R1 490 aa10.31□□□□□ -0.76
DHFR-206ENST00000513048 THAP9Q9H5L6 903 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms