RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 DGKDQ16760 1214 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 NRN1LQ496H8 165 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 TMEM200BQ69YZ2 307 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 KRT40Q6A162 431 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 KLHDC10Q6PID8 442 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 USP51Q70EK9 711 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 POLNQ7Z5Q5 900 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 SPRED1Q7Z699 444 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 RNF180Q86T96 592 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 ANKRD13AQ8IZ07 590 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 FUKQ8N0W3 1084 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 DNERQ8NFT8 737 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 GFM2Q969S9 779 aaKnown RBP4.48□□□□□ -1.69
CHD1-207ENST00000511628 MAML3Q96JK9 1138 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 PLA2G12BQ9BX93 195 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 ZNF341Q9BYN7 854 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 TMPRSS5Q9H3S3 457 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD1-207ENST00000511628 CD248Q9HCU0 757 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 INTS7Q9NVH2 962 aaKnown RBP4.48□□□□□ -1.69
CHD1-207ENST00000511628 MAGEL2Q9UJ55 1249 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 DENND2AQ9ULE3 1009 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 JAG2Q9Y219 1238 aa4.48□□□□□ -1.69
CHD1-207ENST00000511628 hCG_2014768A0A024R1R8 64 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 A0A1W2PRX2 142 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 C1QTNF3-AMACRE9PGA6 284 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 TRAF5O00463 557 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 RAD17O75943 681 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 ACO1P21399 889 aaKnown RBP4.47□□□□□ -1.69
CHD1-207ENST00000511628 STAT3P40763 770 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 SCNN1BP51168 640 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 MECP2P51608 486 aaKnown RBP4.47□□□□□ -1.69
CHD1-207ENST00000511628 ZXDAP98168 799 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 ADAM15Q13444 863 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 NFYCQ13952 458 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 TRIM68Q6AZZ1 485 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 KRT26Q7Z3Y9 468 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 LRRTM3Q86VH5 581 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 SGMS1Q86VZ5 419 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 ZZZ3Q8IYH5 903 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 AHI1Q8N157 1196 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 SHCBP1Q8NEM2 672 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 TMEM176AQ96HP8 235 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 CSRNP2Q9H175 543 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 NELFAQ9H3P2 528 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 THG1LQ9NWX6 298 aaKnown RBP4.47□□□□□ -1.69
CHD1-207ENST00000511628 VWA7Q9Y334 891 aa4.47□□□□□ -1.69
CHD1-207ENST00000511628 RBM8AQ9Y5S9 174 aaKnown RBP4.47□□□□□ -1.69
CHD1-207ENST00000511628 SLC26A4O43511 780 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 FSHBP01225 129 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 PRLP01236 227 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 PTX3P26022 381 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 MSX2P35548 267 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 CDKN1CP49918 316 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 KPNA1P52294 538 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 BCAR1P56945 870 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 KRTAP10-2P60368 255 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 ATP2C1P98194 919 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 OCRLQ01968 901 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 ADCY2Q08462 1091 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 GRM7Q14831 915 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 PCBP1Q15365 356 aaKnown RBP eCLIP4.46□□□□□ -1.7
CHD1-207ENST00000511628 EPHA7Q15375 998 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 TBR1Q16650 682 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 SPDYAQ5MJ70 313 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 STRA8Q7Z7C7 330 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 RTN4RL1Q86UN2 441 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 C11orf74Q86VG3 221 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 PHYKPLQ8IUZ5 450 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 D2HGDHQ8N465 521 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 OR5AN1Q8NGI8 311 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 LPPQ93052 612 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 FOXRED1Q96CU9 486 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 DYDC2Q96IM9 177 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 ELF4Q99607 663 aaPredicted RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 BRINP2Q9C0B6 783 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 MTFR1LQ9H019 292 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 VPS11Q9H270 941 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 OXSMQ9NWU1 459 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 KCMF1Q9P0J7 381 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 NCDNQ9UBB6 729 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 SRRDQ9UH36 339 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 RCAN3Q9UKA8 241 aa4.46□□□□□ -1.7
CHD1-207ENST00000511628 NOP58Q9Y2X3 529 aaKnown RBP4.46□□□□□ -1.7
CHD1-207ENST00000511628 ST20-MTHFSA0A0A6YYL1 179 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 DVL2O14641 736 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 MATN3O15232 486 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 RAB11FIP3O75154 756 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 AMHP03971 560 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 C6P13671 934 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 CD40P25942 277 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 HIBADHP31937 336 aaKnown RBP4.45□□□□□ -1.7
CHD1-207ENST00000511628 GDF5P43026 501 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 EVA1CP58658 441 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 BPIFB4P59827 614 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 IL2P60568 153 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 IGBP1P78318 339 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 SEPT7Q16181 437 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms