RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 GPC3P51654 580 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 EPHB4P54760 987 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 NLRP11P59045 1033 aaKnown RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 PAK2Q13177 524 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 DRP2Q13474 957 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 MXD4Q14582 209 aaPredicted RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 LPIN1Q14693 890 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 KARSQ15046 597 aaKnown RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 PLEKHG4Q58EX7 1191 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 SPECC1Q5M775 1068 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 TMEM240Q5SV17 173 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 ZNF365Q70YC5 407 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 RHPN2Q8IUC4 686 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 LEO1Q8WVC0 666 aaPredicted RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 NLRP7Q8WX94 980 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 SEPT8Q92599 483 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 EPSTI1Q96J88 318 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 RNPC3Q96LT9 517 aaKnown RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 PPP1R16BQ96T49 567 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 IFIH1Q9BYX4 1025 aaKnown RBP14.29□□□□□ -0.12
COL6A6-203ENST00000511332 XPNPEP1Q9NQW7 623 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 KCND2Q9NZV8 630 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 STK17AQ9UEE5 414 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 RCOR1Q9UKL0 485 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
COL6A6-203ENST00000511332 A0A087WWV3 80 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 ASAP2O43150 1006 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 GPR32O75388 356 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 CYP11B2P19099 503 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 TFDP1Q14186 410 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 KCNK18Q7Z418 384 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 HERVK_113Q902F9 699 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 LARP4BQ92615 738 aaKnown RBP14.28□□□□□ -0.12
COL6A6-203ENST00000511332 TMEM143Q96AN5 459 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 NLRP4Q96MN2 994 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 IPO9Q96P70 1041 aaKnown RBP14.28□□□□□ -0.12
COL6A6-203ENST00000511332 PLIN2Q99541 437 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 OSMRQ99650 979 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 TIPINQ9BVW5 301 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 POLR3FQ9H1D9 316 aaPredicted RBP14.28□□□□□ -0.12
COL6A6-203ENST00000511332 ADAMTS10Q9H324 1103 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 PCDHA7Q9UN72 937 aa14.28□□□□□ -0.12
COL6A6-203ENST00000511332 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
COL6A6-203ENST00000511332 RPS6KA5O75582 802 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 SSBP05455 408 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 PLA2G4BP0C869 781 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 EIF4BP23588 611 aaKnown RBP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 STAT6P42226 847 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 LAMTOR4Q0VGL1 99 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 IKBKEQ14164 716 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 GPNMBQ14956 572 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 C9orf50Q5SZB4 431 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 AXDND1Q5T1B0 1012 aaPredicted RBP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 FAM102BQ5T8I3 360 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 USP49Q70CQ1 688 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 OTOP2Q7RTS6 562 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 SYT2Q8N9I0 419 aaPredicted RBP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 PRPF31Q8WWY3 499 aaKnown RBP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 RAD54LQ92698 747 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 KIFAP3Q92845 792 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 VWCEQ96DN2 955 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 DRC1Q96MC2 740 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 PYM1Q9BRP8 204 aaKnown RBP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 GCOM2Q9BZD3 368 aaPredicted RBP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 INO80BQ9C086 356 aaPredicted RBP14.27□□□□□ -0.13
COL6A6-203ENST00000511332 FAM13BQ9NYF5 915 aa14.27□□□□□ -0.13
COL6A6-203ENST00000511332 ABHD14A-ACY1A0A1B0GW23 586 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 GPR182O15218 404 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 DARSP14868 501 aaKnown RBP14.26□□□□□ -0.13
COL6A6-203ENST00000511332 SFPQP23246 707 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL6A6-203ENST00000511332 CD52P31358 61 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 ARL2P36404 184 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 PHKA2P46019 1235 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 KCNJ6P48051 423 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 SLC12A3P55017 1021 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 SHHQ15465 462 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 RESP18Q5W5W9 173 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 RINT1Q6NUQ1 792 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 TMEM40Q8WWA1 233 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 FTHL17Q9BXU8 183 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 BLOC1S4Q9NUP1 217 aa14.26□□□□□ -0.13
COL6A6-203ENST00000511332 A0A087WZ62 844 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 GUCY2CP25092 1073 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 POU5F1BQ06416 359 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 CAPSQ13938 189 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 CSPP1Q1MSJ5 1256 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 RASIP1Q5U651 963 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 ADALQ6DHV7 355 aa14.25□□□□□ -0.13
COL6A6-203ENST00000511332 C1orf186Q6ZWK4 172 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms