RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 LIFRP42702 1097 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TUFMP49411 452 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 MRE11P49959 708 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 PDE1AP54750 535 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 MYL7Q01449 175 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 BFSP1Q12934 665 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ALCAMQ13740 583 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TEAD4Q15561 434 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 KIZQ2M2Z5 673 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 EPC2Q52LR7 807 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 SYCP2LQ5T4T6 812 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 SLFN12LQ6IEE8 588 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 B4GALNT3Q6L9W6 998 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF852Q6ZMS4 543 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 DHX32Q7L7V1 743 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 UBE2Q1Q7Z7E8 422 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 VSIG10LQ86VR7 867 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 STAG2Q8N3U4 1231 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ANKS1AQ92625 1134 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 EDAQ92838 391 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF560Q96MR9 790 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 NUP88Q99567 741 aaPredicted RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ADAM2Q99965 735 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 LRFN3Q9BTN0 628 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 LNPKQ9C0E8 428 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 RUBCNLQ9H714 662 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 KIF9Q9HAQ2 790 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TXNRD2Q9NNW7 524 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 LARSQ9P2J5 1176 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 LSM7Q9UK45 103 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 PIN4Q9Y237 131 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 CLUHO75153 1309 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 B4E1Z4 1266 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 H0Y626 953 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF263O14978 683 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 KIAA0391O15091 583 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TBX3O15119 743 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TRIM16O95361 564 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 F2P00734 622 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 CD4P01730 458 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 P4HBP07237 508 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 PDHBP11177 359 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 GLULP15104 373 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 MUTP22033 750 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TCF7P36402 384 aaPredicted RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 AARSP49588 968 aaKnown RBP eCLIP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 STARD3Q14849 445 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 AASDHQ4L235 1098 aaPredicted RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 PAN2Q504Q3 1202 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ZBTB41Q5SVQ8 909 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 DSTYKQ6XUX3 929 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 AGMOQ6ZNB7 445 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 CENPQQ7L2Z9 268 aaPredicted RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 CYFIP1Q7L576 1253 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 SH3BP5LQ7L8J4 393 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ALYREFQ86V81 257 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ZDHHC14Q8IZN3 488 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 NSUN7Q8NE18 718 aaKnown RBP3.15□□□□□ -1.91
CLOCK-209ENST00000511124 STKLD1Q8NE28 680 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 BEST2Q8NFU1 509 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 VN1R2Q8NFZ6 395 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 MORC4Q8TE76 937 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 KIFAP3Q92845 792 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 SCLYQ96I15 445 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TRIM62Q9BVG3 475 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ANO3Q9BYT9 981 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 JADE2Q9NQC1 790 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 ZDHHC7Q9NXF8 308 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHA6Q9UN73 950 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHA8Q9Y5H6 950 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 TRIOBPQ9H2D6 2365 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 MYO9BQ13459 2157 aa3.15□□□□□ -1.91
CLOCK-209ENST00000511124 DNAJC25-GNG10A0A024R161 153 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 B4GALT4O60513 344 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SNAI1O95863 264 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MMP1P03956 469 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CYBBP04839 570 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SYPP08247 313 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 RPL17P18621 184 aaKnown RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 DDX6P26196 483 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CDC25CP30307 473 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SLC16A2P36021 539 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 NNMTP40261 264 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 NRIP1P48552 1158 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 NUCB2P80303 420 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 KCNH2Q12809 1159 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MTA1Q13330 715 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CBX2Q14781 532 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 NFE2Q16621 373 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-209ENST00000511124 TCEAL5Q5H9L2 206 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MOXD1Q6UVY6 613 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CCDC73Q6ZRK6 1079 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 SERINC5Q86VE9 423 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 MICU3Q86XE3 530 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 FAM178BQ8IXR5 827 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 ADGRF4Q8IZF3 695 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CPA6Q8N4T0 437 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 POF1BQ8WVV4 589 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 PIBF1Q8WXW3 757 aa3.14□□□□□ -1.91
CLOCK-209ENST00000511124 CEP170P1Q96L14 293 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms