RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 LINC01553A4QN01 128 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 LYPLA2O95372 231 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 AMHP03971 560 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 RARRES1P49788 294 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 FXR2P51116 673 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNF8-206ENST00000509989 HTRA4P83105 476 aaPredicted RBP15.16■□□□□ 0.02
SNF8-206ENST00000509989 DSC3Q14574 896 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 EMC2Q15006 297 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 KCNK18Q7Z418 384 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 RHPN2Q8IUC4 686 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 PRPF31Q8WWY3 499 aaKnown RBP15.16■□□□□ 0.02
SNF8-206ENST00000509989 APBB2Q92870 758 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 MAP7D2Q96T17 732 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 MINDY3Q9H8M7 445 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 GPRC5CQ9NQ84 441 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 MTUS1Q9ULD2 1270 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 SQORQ9Y6N5 450 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 RALGAPA2Q2PPJ7 1873 aa15.16■□□□□ 0.02
SNF8-206ENST00000509989 MYO7AQ13402 2215 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 ATP2C1P98194 919 aaPredicted RBP15.15■□□□□ 0.02
SNF8-206ENST00000509989 ORC2Q13416 577 aaPredicted RBP15.15■□□□□ 0.02
SNF8-206ENST00000509989 FOXD4L5Q5VV16 416 aaPredicted RBP15.15■□□□□ 0.02
SNF8-206ENST00000509989 MAEAQ7L5Y9 396 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 IGSF22Q8N9C0 903 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 LRRC15Q8TF66 581 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 FOXD4L4Q8WXT5 416 aaPredicted RBP15.15■□□□□ 0.02
SNF8-206ENST00000509989 INTS4Q96HW7 963 aaKnown RBP15.15■□□□□ 0.02
SNF8-206ENST00000509989 NLRP4Q96MN2 994 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 RAD9AQ99638 391 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 ADAM2Q99965 735 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 POLR3CQ9BUI4 534 aaPredicted RBP15.15■□□□□ 0.02
SNF8-206ENST00000509989 RC3H2Q9HBD1 1191 aaKnown RBP15.15■□□□□ 0.02
SNF8-206ENST00000509989 HCSTQ9UBK5 93 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 LRWD1Q9UFC0 647 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 CLIC4Q9Y696 253 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 MYH11P35749 1972 aa15.15■□□□□ 0.02
SNF8-206ENST00000509989 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 TMEM265A0A087WTH1 108 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 E9PMD0 336 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 USO1O60763 962 aaKnown RBP15.14■□□□□ 0.01
SNF8-206ENST00000509989 EFCAB14O75071 495 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 LINC00271P0C7V0 271 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 SRGAP2CP0DJJ0 459 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 DARSP14868 501 aaKnown RBP15.14■□□□□ 0.01
SNF8-206ENST00000509989 EIF4BP23588 611 aaKnown RBP15.14■□□□□ 0.01
SNF8-206ENST00000509989 TMOD1P28289 359 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 CCT6AP40227 531 aaKnown RBP15.14■□□□□ 0.01
SNF8-206ENST00000509989 POLGP54098 1239 aaPredicted RBP15.14■□□□□ 0.01
SNF8-206ENST00000509989 PKP1Q13835 747 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 RILPL1Q5EBL4 403 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 USP38Q8NB14 1042 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
SNF8-206ENST00000509989 NLRP7Q8WX94 980 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 ARNTL2Q8WYA1 636 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 PNMA5Q96PV4 448 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 PLIN2Q99541 437 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 TSPYL2Q9H2G4 693 aaPredicted RBP15.14■□□□□ 0.01
SNF8-206ENST00000509989 IFT122Q9HBG6 1241 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 TUFT1Q9NNX1 390 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 ANKEF1Q9NU02 776 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 PRUNE2Q8WUY3 3088 aa15.14■□□□□ 0.01
SNF8-206ENST00000509989 VWA3AA6NCI4 1184 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 C9IYK1 514 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 LPXNO60711 386 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 RPA1P27694 616 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 LAMTOR4Q0VGL1 99 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 SF3A1Q15459 793 aaKnown RBP15.13■□□□□ 0.01
SNF8-206ENST00000509989 FAM102BQ5T8I3 360 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 OTUD6AQ7L8S5 288 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 NEK9Q8TD19 979 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 BSNDQ8WZ55 320 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 SCLT1Q96NL6 688 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 RNF19AQ9NV58 838 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 COL4A3BPQ9Y5P4 624 aa15.13■□□□□ 0.01
SNF8-206ENST00000509989 DKC1O60832 514 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNF8-206ENST00000509989 RPLP2P05387 115 aaKnown RBP15.12■□□□□ 0.01
SNF8-206ENST00000509989 GLRA2P23416 452 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 ARL2P36404 184 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 RFC5P40937 340 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 PRPHP41219 470 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 CEBPZQ03701 1054 aaKnown RBP15.12■□□□□ 0.01
SNF8-206ENST00000509989 CAPSQ13938 189 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 PTPAQ15257 358 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 PAN2Q504Q3 1202 aaKnown RBP15.12■□□□□ 0.01
SNF8-206ENST00000509989 HSCBQ8IWL3 235 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 SNX29Q8TEQ0 813 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 GDPD5Q8WTR4 605 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 ZNF689Q96CS4 500 aaPredicted RBP15.12■□□□□ 0.01
SNF8-206ENST00000509989 MTRQ99707 1265 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 PRDM6Q9NQX0 595 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 RGS18Q9NS28 235 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 DDX19AQ9NUU7 478 aaKnown RBP15.12■□□□□ 0.01
SNF8-206ENST00000509989 KIAA1024Q9UPX6 916 aa15.12■□□□□ 0.01
SNF8-206ENST00000509989 MEIS3P2A8K0S8 358 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 GPR182O15218 404 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 STX6O43752 255 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms