RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 CD83Q01151 205 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 NFATC3Q12968 1075 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 FBLN7Q53RD9 439 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 TMEM200BQ69YZ2 307 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 SLFN12LQ6IEE8 588 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 TTLL10Q6ZVT0 673 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 FRMD5Q7Z6J6 570 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 FAM124AQ86V42 546 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 WDR48Q8TAF3 677 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 ZDHHC5Q9C0B5 715 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 ADAMTS20P59510 1910 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 CSF2RBP32927 897 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 LSP1P33241 339 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 EIF4HQ15056 248 aaKnown RBP9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 ATP13A4Q4VNC1 1196 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 KANSL1Q7Z3B3 1105 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 FILIP1Q7Z7B0 1213 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 PHYKPLQ8IUZ5 450 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 C7orf31Q8N865 590 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 RTF1Q92541 710 aaKnown RBP9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 SLC5A5Q92911 643 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 USP40Q9NVE5 1235 aa9.41□□□□□ -0.9
TRAPPC11-206ENST00000509857 HFM1A2PYH4 1435 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 RAB3GAP2Q9H2M9 1393 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 ID4P47928 161 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 RGS3P49796 1198 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 MOGSQ13724 837 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 MYBPC3Q14896 1274 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 RAPGEF6Q8TEU7 1601 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 CEP170Q5SW79 1584 aa9.4□□□□□ -0.9
TRAPPC11-206ENST00000509857 A0A0G2JNJ9 132 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 CPEP16870 476 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 CNGA1P29973 690 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 ADCY8P40145 1251 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 ZNF827Q17R98 1081 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 ZFYVE27Q5T4F4 411 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 GRAMD4Q6IC98 578 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 TUBGCP5Q96RT8 1024 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 RTEL1Q9NZ71 1219 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 Q9UFV3 132 aa9.39□□□□□ -0.91
TRAPPC11-206ENST00000509857 B4GALT3O60512 393 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 HOXA5P20719 270 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 NFKB2Q00653 900 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 MAP3K12Q12852 859 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 DDB1Q16531 1140 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 PRAMEF9Q5VWM5 478 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 IFNL2Q8IZJ0 200 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 LGI4Q8N135 537 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 CARD11Q9BXL7 1154 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 FAM126AQ9BYI3 521 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 PTPN23Q9H3S7 1636 aa9.38□□□□□ -0.91
TRAPPC11-206ENST00000509857 ULK1O75385 1050 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 BCAR1P56945 870 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 STAT4Q14765 748 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 BROXQ5VW32 411 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 TIGD7Q6NT04 549 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 OTOP2Q7RTS6 562 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 KBTBD2Q8IY47 623 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 ZNF496Q96IT1 587 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 TEPSINQ96N21 525 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 MYL10Q9BUA6 226 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 POFUT1Q9H488 388 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 KCMF1Q9P0J7 381 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 MSRAQ9UJ68 235 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 DUSP10Q9Y6W6 482 aa9.37□□□□□ -0.91
TRAPPC11-206ENST00000509857 NUP153P49790 1475 aaKnown RBP9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 A0A0G2JLL6 359 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 PRPF6O94906 941 aaKnown RBP9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 SESN3P58005 492 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 USP10Q14694 798 aaKnown RBP9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 TRIM68Q6AZZ1 485 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 KIAA1841Q6NSI8 718 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 RALYLQ86SE5 291 aaKnown RBP9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 OR5AN1Q8NGI8 311 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 PITHD1Q9GZP4 211 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 HAPLN2Q9GZV7 340 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 SEMA4AQ9H3S1 761 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 MS4A5Q9H3V2 200 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
TRAPPC11-206ENST00000509857 ADCY10Q96PN6 1610 aa9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 GPR39O43194 453 aa9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 HMGCRP04035 888 aa9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 ADCY2Q08462 1091 aa9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 TROQ12816 1431 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 FAM50AQ14320 339 aaKnown RBP9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 NOLC1Q14978 699 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 FRMD7Q6ZUT3 714 aa9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 PLEKHH3Q7Z736 793 aa9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 RASSF3Q86WH2 238 aa9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 RPGRQ92834 1020 aaKnown RBP9.35□□□□□ -0.91
TRAPPC11-206ENST00000509857 UACAQ9BZF9 1416 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 ELL2O00472 640 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 ZNF888P0CJ79 500 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 CNR2P34972 360 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 KCNQ1P51787 676 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms