RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 FAM102BQ5T8I3 360 aa23.82■■□□□ 1.4
LIN54-208ENST00000509748 DIS3L2Q8IYB7 885 aaKnown RBP23.82■■□□□ 1.4
LIN54-208ENST00000509748 ZNF579Q8NAF0 562 aaKnown RBP23.82■■□□□ 1.4
LIN54-208ENST00000509748 NECAB3Q96P71 396 aaPredicted RBP23.82■■□□□ 1.4
LIN54-208ENST00000509748 UHRF1Q96T88 793 aaPredicted RBP23.82■■□□□ 1.4
LIN54-208ENST00000509748 UBE2ZQ9H832 354 aaPredicted RBP23.82■■□□□ 1.4
LIN54-208ENST00000509748 BRMS1Q9HCU9 246 aa23.82■■□□□ 1.4
LIN54-208ENST00000509748 LRFN2Q9ULH4 789 aa23.82■■□□□ 1.4
LIN54-208ENST00000509748 TNFRSF10AO00220 468 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 P4HBP07237 508 aaKnown RBP23.81■■□□□ 1.4
LIN54-208ENST00000509748 COL19A1Q14993 1142 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 TIGD5Q53EQ6 642 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 TCEAL5Q5H9L2 206 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 PLA2G4FQ68DD2 849 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 P2RX5Q93086 422 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 LMAN2LQ9H0V9 348 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 PLAGL2Q9UPG8 496 aa23.81■■□□□ 1.4
LIN54-208ENST00000509748 IBSPP21815 317 aaPredicted RBP23.8■■□□□ 1.4
LIN54-208ENST00000509748 NPEPPSP55786 919 aa23.8■■□□□ 1.4
LIN54-208ENST00000509748 ELAC1Q9H777 363 aaKnown RBP23.8■■□□□ 1.4
LIN54-208ENST00000509748 ALG13Q9NP73 1137 aaKnown RBP23.8■■□□□ 1.4
LIN54-208ENST00000509748 CYP26B1Q9NR63 512 aa23.8■■□□□ 1.4
LIN54-208ENST00000509748 RNF19AQ9NV58 838 aa23.8■■□□□ 1.4
LIN54-208ENST00000509748 TMEM161AQ9NX61 479 aa23.8■■□□□ 1.4
LIN54-208ENST00000509748 RGL1Q9NZL6 768 aa23.8■■□□□ 1.4
LIN54-208ENST00000509748 CSDE1O75534 798 aaKnown RBP23.79■■□□□ 1.4
LIN54-208ENST00000509748 ITGB1P05556 798 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 FGFR4P22455 802 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 DNAJB1P25685 340 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 CCDC83Q8IWF9 413 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 C4orf19Q8IY42 314 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 SLFN12Q8IYM2 578 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 IL27Q8NEV9 243 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 SPPL3Q8TCT6 385 aa23.79■■□□□ 1.4
LIN54-208ENST00000509748 NSUN3Q9H649 340 aaKnown RBP23.79■■□□□ 1.4
LIN54-208ENST00000509748 SUCLA2Q9P2R7 463 aaPredicted RBP23.79■■□□□ 1.4
LIN54-208ENST00000509748 CDC42EP1Q00587 391 aa23.78■■□□□ 1.4
LIN54-208ENST00000509748 NAALADL2Q58DX5 795 aa23.78■■□□□ 1.4
LIN54-208ENST00000509748 KLHL23Q8NBE8 558 aa23.78■■□□□ 1.4
LIN54-208ENST00000509748 NLRP7Q8WX94 980 aa23.78■■□□□ 1.4
LIN54-208ENST00000509748 DYDC2Q96IM9 177 aa23.78■■□□□ 1.4
LIN54-208ENST00000509748 LLPHQ9BRT6 129 aaKnown RBP23.78■■□□□ 1.4
LIN54-208ENST00000509748 LXNQ9BS40 222 aa23.78■■□□□ 1.4
LIN54-208ENST00000509748 RNF216Q9NWF9 866 aaPredicted RBP23.78■■□□□ 1.4
LIN54-208ENST00000509748 HCSTQ9UBK5 93 aa23.78■■□□□ 1.4
LIN54-208ENST00000509748 A0A087WZ62 844 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 TBKBP1A7MCY6 615 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 ZBTB39O15060 712 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 MARCH6O60337 910 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 DKC1O60832 514 aaKnown RBP eCLIP23.77■■□□□ 1.4
LIN54-208ENST00000509748 SLITRK3O94933 977 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 BAG4O95429 457 aaKnown RBP23.77■■□□□ 1.4
LIN54-208ENST00000509748 FGFR1P11362 822 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 DNM2P50570 870 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 LEXMQ3ZCV2 418 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 NCAPH2Q6IBW4 605 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 KSR1Q8IVT5 923 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.77■■□□□ 1.4
LIN54-208ENST00000509748 MTMR9Q96QG7 549 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 FDXACB1Q9BRP7 624 aaPredicted RBP23.77■■□□□ 1.4
LIN54-208ENST00000509748 DHX33Q9H6R0 707 aaKnown RBP23.77■■□□□ 1.4
LIN54-208ENST00000509748 ATP6V0A4Q9HBG4 840 aa23.77■■□□□ 1.4
LIN54-208ENST00000509748 KCNA5P22460 613 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 RBM25P49756 843 aaKnown RBP23.76■■□□□ 1.39
LIN54-208ENST00000509748 GUCY1B3Q02153 619 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 TRIM29Q14134 588 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 CTTNQ14247 550 aaKnown RBP23.76■■□□□ 1.39
LIN54-208ENST00000509748 ZNF410Q86VK4 478 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 ECHDC2Q86YB7 292 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 NEK9Q8TD19 979 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 CEP170P1Q96L14 293 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 ZSCAN31Q96LW9 406 aaPredicted RBP23.76■■□□□ 1.39
LIN54-208ENST00000509748 HSD17B14Q9BPX1 270 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 GCOM2Q9BZD3 368 aaPredicted RBP23.76■■□□□ 1.39
LIN54-208ENST00000509748 CWH43Q9H720 699 aa23.76■■□□□ 1.39
LIN54-208ENST00000509748 TYW1Q9NV66 732 aaKnown RBP23.76■■□□□ 1.39
LIN54-208ENST00000509748 ZSCAN20P17040 1043 aaPredicted RBP23.75■■□□□ 1.39
LIN54-208ENST00000509748 YWHABP31946 246 aaKnown RBP23.75■■□□□ 1.39
LIN54-208ENST00000509748 CALCRLQ16602 461 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 LRRC55Q6ZSA7 311 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 ZNF598Q86UK7 904 aaKnown RBP23.75■■□□□ 1.39
LIN54-208ENST00000509748 RHPN2Q8IUC4 686 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 PABPC5Q96DU9 382 aaKnown RBP23.75■■□□□ 1.39
LIN54-208ENST00000509748 SCLT1Q96NL6 688 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 CASD1Q96PB1 797 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 JPH2Q9BR39 696 aaPredicted RBP23.75■■□□□ 1.39
LIN54-208ENST00000509748 TMEM60Q9H2L4 133 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 ZSWIM4Q9H7M6 989 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 PCDHA12Q9UN75 941 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 PPME1Q9Y570 386 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 PLXNA4Q9HCM2 1894 aa23.75■■□□□ 1.39
LIN54-208ENST00000509748 A0A0U1RQF3 1178 aa23.74■■□□□ 1.39
LIN54-208ENST00000509748 ATF7P17544 494 aaPredicted RBP23.74■■□□□ 1.39
LIN54-208ENST00000509748 LTBRP36941 435 aa23.74■■□□□ 1.39
LIN54-208ENST00000509748 CYP4A11Q02928 519 aa23.74■■□□□ 1.39
LIN54-208ENST00000509748 HYAL1Q12794 435 aa23.74■■□□□ 1.39
LIN54-208ENST00000509748 CTC1Q2NKJ3 1217 aa23.74■■□□□ 1.39
LIN54-208ENST00000509748 EIF2AK1Q9BQI3 630 aaKnown RBP23.74■■□□□ 1.39
LIN54-208ENST00000509748 TMEM117Q9H0C3 514 aa23.74■■□□□ 1.39
LIN54-208ENST00000509748 TTC12Q9H892 705 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms