RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 UBE4BO95155 1302 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 FRMPD3Q5JV73 1810 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 MOXD2PA6NHM9 499 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 PSMA7O14818 248 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 PGK1P00558 417 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 GNAT1P11488 350 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 PLS3P13797 630 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 TMOD1P28289 359 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 ERCC5P28715 1186 aaPredicted RBP11.48□□□□□ -0.57
RFC1-211ENST00000509084 DNM2P50570 870 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 LBX1P52954 281 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 SMTNP53814 917 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 BEX3Q00994 111 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 RAD51AP2Q09MP3 1159 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 MAPK7Q13164 816 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 DMP1Q13316 513 aaPredicted RBP11.48□□□□□ -0.57
RFC1-211ENST00000509084 GRIK4Q16099 956 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 KIAA0753Q2KHM9 967 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 FAM102BQ5T8I3 360 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 IER5Q5VY09 327 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 SFR1Q86XK3 245 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 MYCT1Q8N699 235 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 FAM200AQ8TCP9 573 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 SH3TC2Q8TF17 1288 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 HVCN1Q96D96 273 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 IFT74Q96LB3 600 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 CEP89Q96ST8 783 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 TSEN34Q9BSV6 310 aaKnown RBP11.48□□□□□ -0.57
RFC1-211ENST00000509084 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 RNPEPQ9H4A4 650 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 PDLIM7Q9NR12 457 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 PHLPP2Q6ZVD8 1323 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 NRCAMQ92823 1304 aa11.48□□□□□ -0.57
RFC1-211ENST00000509084 IGKV6-21A0A0C4DH24 114 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 BICDL2A1A5D9 508 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 EIF3DO15371 548 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFC1-211ENST00000509084 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
RFC1-211ENST00000509084 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 INSRRP14616 1297 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 CAPN2P17655 700 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 ZNF165P49910 485 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 TPM4P67936 248 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
RFC1-211ENST00000509084 ODR4Q5SWX8 454 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 MYOCDQ8IZQ8 938 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 GUF1Q8N442 669 aaKnown RBP11.47□□□□□ -0.57
RFC1-211ENST00000509084 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 PSPC1Q8WXF1 523 aaKnown RBP11.47□□□□□ -0.57
RFC1-211ENST00000509084 KAT2BQ92831 832 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 DHTKD1Q96HY7 919 aaPredicted RBP11.47□□□□□ -0.57
RFC1-211ENST00000509084 SH2D3AQ9BRG2 576 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 SEZ6LQ9BYH1 1024 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 ST6GALNAC4Q9H4F1 302 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 MRPL44Q9H9J2 332 aaKnown RBP11.47□□□□□ -0.57
RFC1-211ENST00000509084 PAK6Q9NQU5 681 aaPredicted RBP11.47□□□□□ -0.57
RFC1-211ENST00000509084 XPNPEP1Q9NQW7 623 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 GDAQ9Y2T3 454 aa11.47□□□□□ -0.57
RFC1-211ENST00000509084 MYADML2A6NDP7 307 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 GOLGA6L3A6NEY3 463 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 SMTNL1A8MU46 457 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 BECN2A8MW95 431 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 ZBTB42B2RXF5 422 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 KBTBD13C9JR72 458 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
RFC1-211ENST00000509084 IKBKBO14920 756 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 ASAP2O43150 1006 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 GCNT3O95395 438 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 C22orf31O95567 290 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 ASGR1P07306 291 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 SMIM10L2AP0DMW4 78 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 SMIM10L2BP0DMW5 78 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 BMP6P22004 513 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 ARL2P36404 184 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 NAMPTP43490 491 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 STK4Q13043 487 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 PAK1Q13153 545 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 TFDP1Q14186 410 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 LRRC41Q15345 812 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 CCSAPQ6IQ19 270 aaPredicted RBP11.46□□□□□ -0.57
RFC1-211ENST00000509084 FOXR2Q6PJQ5 311 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 C11orf57Q6ZUT1 292 aaPredicted RBP11.46□□□□□ -0.57
RFC1-211ENST00000509084 MAEAQ7L5Y9 396 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 SESTD1Q86VW0 696 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 DAW1Q8N136 415 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 ADSSL1Q8N142 457 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 C7orf31Q8N865 590 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 KIAA0895Q8NCT3 520 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 KCNN1Q92952 543 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 ARMC5Q96C12 935 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 MAP7D2Q96T17 732 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 POLR3FQ9H1D9 316 aaPredicted RBP11.46□□□□□ -0.57
RFC1-211ENST00000509084 SLC39A2Q9NP94 309 aa11.46□□□□□ -0.57
RFC1-211ENST00000509084 MYH11P35749 1972 aa11.46□□□□□ -0.58
RFC1-211ENST00000509084 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms