RNA–Protein interactions for RNA: ENST00000508830.5

CAST-224, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-224ENST00000508830 RASGEF1CQ8N431 466 aa17.14■□□□□ 0.33
CAST-224ENST00000508830 HSD17B14Q9BPX1 270 aa17.14■□□□□ 0.33
CAST-224ENST00000508830 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.14■□□□□ 0.337e-7■■■■■ 104.8
CAST-224ENST00000508830 SUCLA2Q9P2R7 463 aaPredicted RBP17.14■□□□□ 0.33
CAST-224ENST00000508830 DNAJC12Q9UKB3 198 aa17.14■□□□□ 0.33
CAST-224ENST00000508830 TBX3O15119 743 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 EYA4O95677 639 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 GH2P01242 217 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 ZNF76P36508 570 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
CAST-224ENST00000508830 PLS1Q14651 629 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 IFI16Q16666 785 aaKnown RBP17.13■□□□□ 0.33
CAST-224ENST00000508830 ARHGAP44Q17R89 818 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 SYDE2Q5VT97 1194 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 ATP8B4Q8TF62 1192 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 ALG3Q92685 438 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 CALR3Q96L12 384 aaKnown RBP17.13■□□□□ 0.33
CAST-224ENST00000508830 FAM20AQ96MK3 541 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 THAP2Q9H0W7 228 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 CAPN7Q9Y6W3 813 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 ANKRD31Q8N7Z5 1873 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
CAST-224ENST00000508830 RPL13P26373 211 aaKnown RBP17.13■□□□□ 0.33
CAST-224ENST00000508830 SOX5P35711 763 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 ECE1P42892 770 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 FMO5P49326 533 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 SYT11Q9BT88 431 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 METTL14Q9HCE5 456 aaKnown RBP17.13■□□□□ 0.33
CAST-224ENST00000508830 OLFML3Q9NRN5 406 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 TMOD4Q9NZQ9 345 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.13■□□□□ 0.33
CAST-224ENST00000508830 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
CAST-224ENST00000508830 NRXN2Q9P2S2 1712 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 G3V3G9 751 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 SLC16A3O15427 465 aaKnown RBP17.12■□□□□ 0.33
CAST-224ENST00000508830 DDX3YO15523 660 aaKnown RBP17.12■□□□□ 0.33
CAST-224ENST00000508830 STAT1P42224 750 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 FNTAP49354 379 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 DHX9Q08211 1270 aaKnown RBP17.12■□□□□ 0.33
CAST-224ENST00000508830 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 OTOP1Q7RTM1 612 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 ZDHHC15Q96MV8 337 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 SEPT11Q9NVA2 429 aaKnown RBP17.12■□□□□ 0.33
CAST-224ENST00000508830 FAM13AO94988 1023 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 CFBP00751 764 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 CIITAP33076 1130 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 MARCKSL1P49006 195 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 IFT88Q13099 833 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
CAST-224ENST00000508830 SLC20A1Q8WUM9 679 aa17.12■□□□□ 0.33
CAST-224ENST00000508830 NOVA2Q9UNW9 492 aaKnown RBP17.12■□□□□ 0.33
CAST-224ENST00000508830 HNRNPH1P31943 449 aaKnown RBP17.11■□□□□ 0.33
CAST-224ENST00000508830 DLG4P78352 724 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 PHLDB3Q6NSJ2 640 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 TATDN1Q6P1N9 297 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 MAEAQ7L5Y9 396 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
CAST-224ENST00000508830 PRR12Q9ULL5 1215 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 ATP8A1Q9Y2Q0 1164 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 GOLGA6L10A6NI86 522 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 FAM107AO95990 144 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 SHBGP04278 402 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 PSMC2P35998 433 aaKnown RBP17.11■□□□□ 0.33
CAST-224ENST00000508830 PPATQ06203 517 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 ABCB5Q2M3G0 1257 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 VPS36Q86VN1 386 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 CPNE8Q86YQ8 564 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 EIF1ADQ8N9N8 165 aaKnown RBP17.11■□□□□ 0.33
CAST-224ENST00000508830 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
CAST-224ENST00000508830 ZSWIM2Q8NEG5 633 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 MDM1Q8TC05 714 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.33
CAST-224ENST00000508830 POLR3CQ9BUI4 534 aaPredicted RBP17.11■□□□□ 0.33
CAST-224ENST00000508830 AGPAT3Q9NRZ7 376 aa17.11■□□□□ 0.33
CAST-224ENST00000508830 A0A0A6YYK5 440 aaPredicted RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 FERP16591 822 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 ANXA13P27216 316 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 MAGOHP61326 146 aaKnown RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 SF3A3Q12874 501 aaKnown RBP eCLIP17.1■□□□□ 0.33
CAST-224ENST00000508830 LRCH2Q5VUJ6 765 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 LRIG3Q6UXM1 1119 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 B4GALNT4Q76KP1 1039 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 RFFLQ8WZ73 363 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 MAGOHBQ96A72 148 aaKnown RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 ACP6Q9NPH0 428 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 AMFRQ9UKV5 643 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 GTPBP10A4D1E9 387 aaKnown RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 FOXN3O00409 490 aaPredicted RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 BMP3P12645 472 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 MMP14P50281 582 aa17.1■□□□□ 0.33
CAST-224ENST00000508830 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 TBC1D10BQ4KMP7 808 aaPredicted RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 RNF187Q5TA31 235 aaPredicted RBP17.1■□□□□ 0.33
CAST-224ENST00000508830 ZNF746Q6NUN9 644 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms