RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 NLRX1Q86UT6 975 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 INPP4AQ96PE3 977 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 SENP7Q9BQF6 1050 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 NLRC4Q9NPP4 1024 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 ARMCX3Q9UH62 379 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CSADQ9Y600 493 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 DUSP10Q9Y6W6 482 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 RSPH10B2B2RC85 870 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 SLC16A3O15427 465 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 MOCS3O95396 460 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 RSPH10BP0C881 870 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 ERCC3P19447 782 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 HOXD13P35453 343 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 IREB2P48200 963 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CASP8Q14790 479 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 ASTE1Q2TB18 679 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CST9Q5W186 159 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 HGSNATQ68CP4 663 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CHST13Q8NET6 341 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CDHR1Q96JP9 859 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 TIPINQ9BVW5 301 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 VIPAS39Q9H9C1 493 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
PRPF40B-203ENST00000508736 A0A0G2JMZ2 1700 aa12.65□□□□□ -0.39
PRPF40B-203ENST00000508736 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 WDR64B1ANS9 1081 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 NOL4O94818 638 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 NR3C2P08235 984 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 MAPTP10636 758 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 CYP2C19P33261 490 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 PPATQ06203 517 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 KCNH2Q12809 1159 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 RAPGEF1Q13905 1077 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 ASIC2Q16515 512 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 CCDC181Q5TID7 509 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 C4orf19Q8IY42 314 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 C2orf69Q8N8R5 385 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 BANK1Q8NDB2 785 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 GBA2Q9HCG7 927 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 CYP39A1Q9NYL5 469 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 NFASCO94856 1347 aa12.64□□□□□ -0.39
PRPF40B-203ENST00000508736 GCNT3O95395 438 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 AFPP02771 609 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 MYBP10242 640 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 MYCLP12524 364 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 XRCC5P13010 732 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 PAFAH1B1P43034 410 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ZNF746Q6NUN9 644 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 LBX2Q6XYB7 198 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 MYCT1Q8N699 235 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 PDE11AQ9HCR9 933 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 MED4Q9NPJ6 270 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 PLCB1Q9NQ66 1216 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 A1CFQ9NQ94 594 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 AIPL1Q9NZN9 384 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 RNF14Q9UBS8 474 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 FBXO40Q9UH90 709 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 BZW2Q9Y6E2 419 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 MYH11P35749 1972 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 PTPRFP10586 1907 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 DDX39AO00148 427 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ZBTB39O15060 712 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 RARRES1P49788 294 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 PSMC5P62195 406 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 KLHL30Q0D2K2 578 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ALCAMQ13740 583 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 SLC18A3Q16572 532 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 C10orf76Q5T2E6 689 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 PADI6Q6TGC4 694 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ERO1BQ86YB8 467 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ANKRD13AQ8IZ07 590 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 MMGT1Q8N4V1 131 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 TMEM174Q8WUU8 243 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 IWS1Q96ST2 819 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 OSBPL9Q96SU4 736 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 STRA6Q9BX79 667 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 GANQ9H2C0 597 aa12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-203ENST00000508736 ASTN1O14525 1302 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms