RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 MAPKAPK2P49137 400 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 GPR85P60893 370 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 ZNF200P98182 395 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 TMEM62Q0P6H9 643 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 CBX2Q14781 532 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 LONRF2Q1L5Z9 754 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 STYK1Q6J9G0 422 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 ZC3H14Q6PJT7 736 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 IFNL3Q8IZI9 196 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 RTF1Q92541 710 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 KISS1RQ969F8 398 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 KCNJ15Q99712 375 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 CNTD2Q9H8S5 307 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 NDOR1Q9UHB4 597 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 COA3Q9Y2R0 106 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 USP16Q9Y5T5 823 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 VIRMAQ69YN4 1812 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 TEX51A0A1B0GUA7 166 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 ESYT3A0FGR9 886 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PEX10O60683 326 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 CAMTA2O94983 1202 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 C1QTNF9P0C862 333 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 CDR1P51861 262 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 EPHB3P54753 998 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 C1QTNF8P60827 252 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 DLG4P78352 724 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 SQSTM1Q13501 440 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 TAF7Q15545 349 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 DALRD3Q5D0E6 543 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 TBC1D9BQ66K14 1250 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 OLFML2BQ68BL8 750 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 RSPO2Q6UXX9 243 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 LBX2Q6XYB7 198 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 MTDHQ86UE4 582 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 LDHDQ86WU2 507 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 JMYQ8N9B5 988 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 NETO2Q8NC67 525 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PNISRQ8TF01 805 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PTPRN2Q92932 1015 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PEX11GQ96HA9 241 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 RNPC3Q96LT9 517 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PNNQ9H307 717 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PRKRIP1Q9H875 184 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 GCM1Q9NP62 436 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 MIS18AQ9NYP9 233 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 MBD1Q9UIS9 605 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 NUDT5Q9UKK9 219 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PCDHA9Q9Y5H5 950 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 PCDHA8Q9Y5H6 950 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 MRPL42Q9Y6G3 142 aaKnown RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 X6R8D5 127 aa4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 N4BP2Q86UW6 1770 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-226ENST00000508635 MYBBP1AQ9BQG0 1328 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 MAPK8IP3Q9UPT6 1336 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 NRXN2Q9P2S2 1712 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 H7BY64 318 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 NFIBO00712 420 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 AQP7O14520 342 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 SGSM2O43147 1006 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 DGKIO75912 1065 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 COL6A2P12110 1019 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 GRK2P25098 689 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 GRK3P35626 688 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 PIP4K2AP48426 406 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 EIF4A1P60842 406 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 GABREP78334 506 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 GUCY1A3Q02108 690 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 KIZQ2M2Z5 673 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 ZC3H12BQ5HYM0 836 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 MROH9Q5TGP6 573 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 ATG14Q6ZNE5 492 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 C2CD5Q86YS7 1000 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 DCP2Q8IU60 420 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 SLC7A14Q8TBB6 771 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 ZNF526Q8TF50 670 aaPredicted RBP4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 ALG3Q92685 438 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 THUMPD2Q9BTF0 503 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 BRIP1Q9BX63 1249 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 AP5M1Q9H0R1 490 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 CDIP1Q9H305 208 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 IPPKQ9H8X2 491 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 PALD1Q9ULE6 856 aa4.53□□□□□ -1.68
UBE2D3-226ENST00000508635 CARMIL3Q8ND23 1372 aa4.53□□□□□ -1.69
UBE2D3-226ENST00000508635 BRCA1P38398 1863 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 TCAF2A6NFQ2 919 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 H0YIN7 160 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 HRKO00198 91 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 PPP1R12AO14974 1030 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 SEMA7AO75326 666 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 CRTAMO95727 393 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 SOD2P04179 222 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 SRGAP2CP0DJJ0 459 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 PMLP29590 882 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 RIPK4P57078 832 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 C21orf62-AS1Q17RA5 79 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 STEAP3Q658P3 488 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 PRR5LQ6MZQ0 368 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 CLEC4GQ6UXB4 293 aa4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 MAMDC2Q7Z304 686 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-226ENST00000508635 MILR1Q7Z6M3 343 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms