RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GCOM2Q9BZD3 368 aaPredicted RBP10.16□□□□□ -0.78
NUP54-207ENST00000508583 BHMT2Q9H2M3 363 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 PRO3102Q9H379 93 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 STK17AQ9UEE5 414 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 GINS2Q9Y248 185 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 COL4A3BPQ9Y5P4 624 aa10.16□□□□□ -0.78
NUP54-207ENST00000508583 PHLPP2Q6ZVD8 1323 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 TMEM150BA6NC51 233 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 PP2D1A8MPX8 630 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 ZBBXA8MT70 800 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
NUP54-207ENST00000508583 CUTAO60888 179 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 NBNO60934 754 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 RPS6KA5O75582 802 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 VTNP04004 478 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 ACRP10323 421 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 GHRP10912 638 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 CYP11B2P19099 503 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 SFPQP23246 707 aaKnown RBP eCLIP10.15□□□□□ -0.78
NUP54-207ENST00000508583 EIF4BP23588 611 aaKnown RBP10.15□□□□□ -0.78
NUP54-207ENST00000508583 PHKA2P46019 1235 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 GPC3P51654 580 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 DNM1Q05193 864 aaKnown RBP10.15□□□□□ -0.78
NUP54-207ENST00000508583 NCBP1Q09161 790 aaKnown RBP10.15□□□□□ -0.78
NUP54-207ENST00000508583 TMEM62Q0P6H9 643 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 PPP2R5AQ15172 486 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 KIZQ2M2Z5 673 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 TRAF7Q6Q0C0 670 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 PADI6Q6TGC4 694 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 PHOSPHO2Q8TCD6 241 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 IFT74Q96LB3 600 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 SPATA32Q96LK8 384 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 NLRP4Q96MN2 994 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 SLC9A7Q96T83 725 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.15□□□□□ -0.78
NUP54-207ENST00000508583 MMTAG2Q9BU76 263 aaKnown RBP10.15□□□□□ -0.78
NUP54-207ENST00000508583 CSRNP2Q9H175 543 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 FAM13BQ9NYF5 915 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 TFIP11Q9UBB9 837 aaKnown RBP10.15□□□□□ -0.78
NUP54-207ENST00000508583 SLC4A7Q9Y6M7 1214 aa10.15□□□□□ -0.78
NUP54-207ENST00000508583 SCN5AQ14524 2016 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 GPR32O75388 356 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 AMHP03971 560 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 SCP2P22307 547 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 CDC25AP30304 524 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 EPHB4P54760 987 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 POU5F1BQ06416 359 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 LPIN1Q14693 890 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 MBTPS1Q14703 1052 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 SHHQ15465 462 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 LRIT3Q3SXY7 679 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 FOXD4L6Q3SYB3 417 aaPredicted RBP10.14□□□□□ -0.79
NUP54-207ENST00000508583 TMEM119Q4V9L6 283 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 FAM102BQ5T8I3 360 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 RRAGBQ5VZM2 374 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 FOXD4L3Q6VB84 417 aaPredicted RBP10.14□□□□□ -0.79
NUP54-207ENST00000508583 OTOP2Q7RTS6 562 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 SRGAP1Q7Z6B7 1085 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 SYT2Q8N9I0 419 aaPredicted RBP10.14□□□□□ -0.79
NUP54-207ENST00000508583 DBF4BQ8NFT6 615 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 PRPF31Q8WWY3 499 aaKnown RBP10.14□□□□□ -0.79
NUP54-207ENST00000508583 SYMPKQ92797 1274 aaKnown RBP10.14□□□□□ -0.79
NUP54-207ENST00000508583 ZBTB10Q96DT7 871 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 OSMRQ99650 979 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 SH2D3AQ9BRG2 576 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 NFKBIZQ9BYH8 718 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 LRRC27Q9C0I9 530 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 C2orf40Q9H1Z8 148 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 CUEDC2Q9H467 287 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 C17orf75Q9HAS0 396 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 RCOR1Q9UKL0 485 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 SIP14410 1827 aa10.14□□□□□ -0.79
NUP54-207ENST00000508583 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 H0YCG3 227 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 ZBTB39O15060 712 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 ERLIN2O94905 339 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 SSBP05455 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
NUP54-207ENST00000508583 PLA2G4BP0C869 781 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 DARSP14868 501 aaKnown RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 ZSCAN20P17040 1043 aaPredicted RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 PLCG1P19174 1290 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 GUCY2CP25092 1073 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 ABCD1P33897 745 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 DDIT3P35638 169 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 STAT6P42226 847 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 LAMTOR4Q0VGL1 99 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 NFX1Q12986 1120 aaKnown RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 DMP1Q13316 513 aaPredicted RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 GRB10Q13322 594 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 KARSQ15046 597 aaKnown RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 RASIP1Q5U651 963 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 ZBTB8OSQ8IWT0 167 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 RNF149Q8NC42 400 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 LARP4BQ92615 738 aaKnown RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 TMEM143Q96AN5 459 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 CCDC34Q96HJ3 373 aa10.13□□□□□ -0.79
NUP54-207ENST00000508583 POLR3FQ9H1D9 316 aaPredicted RBP10.13□□□□□ -0.79
NUP54-207ENST00000508583 ADAMTS10Q9H324 1103 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms