RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 TSHZ1Q6ZSZ6 1077 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 RHPN2Q8IUC4 686 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 KSR1Q8IVT5 923 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 TCP11Q8WWU5 503 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 PRPF31Q8WWY3 499 aaKnown RBP11.75□□□□□ -0.53
SKI-204ENST00000508416 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 EPSTI1Q96J88 318 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 SCLT1Q96NL6 688 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 OSMRQ99650 979 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 IFIH1Q9BYX4 1025 aaKnown RBP11.75□□□□□ -0.53
SKI-204ENST00000508416 NT5C3AQ9H0P0 336 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
SKI-204ENST00000508416 BHMT2Q9H2M3 363 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 ADAMTS10Q9H324 1103 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 AGO3Q9H9G7 860 aaKnown RBP11.75□□□□□ -0.53
SKI-204ENST00000508416 ATP6V0A4Q9HBG4 840 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 XPNPEP1Q9NQW7 623 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 SLC4A7Q9Y6M7 1214 aa11.75□□□□□ -0.53
SKI-204ENST00000508416 RANBP2P49792 3224 aaKnown RBP11.74□□□□□ -0.53
SKI-204ENST00000508416 ABHD14A-ACY1A0A1B0GW23 586 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
SKI-204ENST00000508416 PPP6R2O75170 966 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 RPS6KA5O75582 802 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 CYP11B2P19099 503 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 CD52P31358 61 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 DDIT3P35638 169 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 GPC3P51654 580 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 MAEAQ7L5Y9 396 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 KCNK18Q7Z418 384 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 RASSF8Q8NHQ8 419 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 NLRP7Q8WX94 980 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 PSPC1Q8WXF1 523 aaKnown RBP11.74□□□□□ -0.53
SKI-204ENST00000508416 APBB2Q92870 758 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 CCSER1Q9C0I3 900 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 PADI3Q9ULW8 664 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 NOC2LQ9Y3T9 749 aaKnown RBP11.74□□□□□ -0.53
SKI-204ENST00000508416 ATP6V1DQ9Y5K8 247 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 COL4A3BPQ9Y5P4 624 aa11.74□□□□□ -0.53
SKI-204ENST00000508416 A0A087WZ62 844 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 GPR182O15218 404 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 ASAP2O43150 1006 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 CUTAO60888 179 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 EFCAB14O75071 495 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 SSBP05455 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
SKI-204ENST00000508416 SRGAP2CP0DJJ0 459 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 ARL2P36404 184 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 LAMTOR4Q0VGL1 99 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 PAK2Q13177 524 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 MXD4Q14582 209 aaPredicted RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 KARSQ15046 597 aaKnown RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 LRIT3Q3SXY7 679 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 TMEM119Q4V9L6 283 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 ODR4Q5SWX8 454 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 ZNF410Q86VK4 478 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 MCPH1Q8NEM0 835 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 KCNG4Q8TDN1 519 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 TMEM40Q8WWA1 233 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 NLRP4Q96MN2 994 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 GCOM2Q9BZD3 368 aaPredicted RBP11.73□□□□□ -0.53
SKI-204ENST00000508416 CCDC39Q9UFE4 941 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 ST3GAL5Q9UNP4 418 aa11.73□□□□□ -0.53
SKI-204ENST00000508416 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 CSDE1O75534 798 aaKnown RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 PLA2G4BP0C869 781 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 DARSP14868 501 aaKnown RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 PLCG1P19174 1290 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 TXLNAP40222 546 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 KCNJ6P48051 423 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 ME1P48163 572 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 WDR5P61964 334 aaKnown RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 KRT85P78386 507 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.72□□□□□ -0.53
SKI-204ENST00000508416 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 PANK2Q9BZ23 570 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 INO80BQ9C086 356 aaPredicted RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
SKI-204ENST00000508416 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 ERVK-5Q9HDB9 667 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 GPRC5CQ9NQ84 441 aa11.72□□□□□ -0.53
SKI-204ENST00000508416 GRXCR1A8MXD5 290 aa11.71□□□□□ -0.53
SKI-204ENST00000508416 ENPP3O14638 875 aa11.71□□□□□ -0.53
SKI-204ENST00000508416 ATP2A2P16615 1042 aaKnown RBP11.71□□□□□ -0.53
SKI-204ENST00000508416 GLRA2P23416 452 aa11.71□□□□□ -0.53
SKI-204ENST00000508416 SLC12A3P55017 1021 aa11.71□□□□□ -0.53
SKI-204ENST00000508416 TFDP1Q14186 410 aa11.71□□□□□ -0.53
SKI-204ENST00000508416 DHX8Q14562 1220 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms