RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PRPF3O43395 683 aaKnown RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 SORBS3O60504 671 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 ARHGEF15O94989 841 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 SCG2P13521 617 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 IFNAR1P17181 557 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 LORP23490 312 aaPredicted RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 EDNRBP24530 442 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 RBM25P49756 843 aaKnown RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 TNFAIP2Q03169 654 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 SSRP1Q08945 709 aaKnown RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 PPP2R5BQ15173 497 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 ANKRD1Q15327 319 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 LRRC41Q15345 812 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 ENOX2Q16206 610 aaKnown RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 ME3Q16798 604 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 PFKFB3Q16875 520 aaPredicted RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 SEPT14Q6ZU15 432 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 NPAS4Q8IUM7 802 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 FBF1Q8TES7 1133 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 WHAMMQ8TF30 809 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 COPS5Q92905 334 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 CUL5Q93034 780 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 FERMT2Q96AC1 680 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 PGBD1Q96JS3 809 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 BTBD6Q96KE9 485 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 SPACA7Q96KW9 195 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 WDR11Q9BZH6 1224 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 ALDH8A1Q9H2A2 487 aaPredicted RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 C11orf49Q9H6J7 331 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 UPF2Q9HAU5 1272 aaKnown RBP10.86□□□□□ -0.67
CLCN3-205ENST00000506924 VTA1Q9NP79 307 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 PRDM6Q9NQX0 595 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 TMEM260Q9NX78 707 aa10.86□□□□□ -0.67
CLCN3-205ENST00000506924 SYNRGQ9UMZ2 1314 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 SMCO2A6NFE2 343 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 B4DLN1 442 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 DYNC1LI2O43237 492 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-205ENST00000506924 PFKFB2O60825 505 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 C6orf222P0C671 652 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-205ENST00000506924 ADCY7P51828 1080 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 MRPL12P52815 198 aaKnown RBP10.85□□□□□ -0.67
CLCN3-205ENST00000506924 BEX3Q00994 111 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 GHRHRQ02643 423 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 PGM5Q15124 567 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 STXBP2Q15833 593 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 CHSY3Q70JA7 882 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 NECAB2Q7Z6G3 386 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 UBE2Q1Q7Z7E8 422 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 FAM35AQ86V20 835 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 GALNT12Q8IXK2 581 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 ARRDC4Q8NCT1 418 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 DPF3Q92784 378 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 AIFM3Q96NN9 605 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 MPHOSPH6Q99547 160 aaKnown RBP10.85□□□□□ -0.67
CLCN3-205ENST00000506924 PDCD2LQ9BRP1 358 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 BACH2Q9BYV9 841 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 SENP6Q9GZR1 1112 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-205ENST00000506924 BARHL2Q9NY43 387 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 RTEL1Q9NZ71 1219 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
CLCN3-205ENST00000506924 KBTBD13C9JR72 458 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 EREGO14944 169 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 ADAMTS4O75173 837 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 DUSP11O75319 330 aaKnown RBP10.84□□□□□ -0.67
CLCN3-205ENST00000506924 ARIH2O95376 493 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 GHRHP01286 108 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 TXNP10599 105 aaKnown RBP10.84□□□□□ -0.67
CLCN3-205ENST00000506924 ORC1Q13415 861 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 JAKMIP3Q5VZ66 844 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 IQSEC1Q6DN90 963 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 CPLX2Q6PUV4 134 aaKnown RBP10.84□□□□□ -0.67
CLCN3-205ENST00000506924 TLK2Q86UE8 772 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 CACTIN-AS1Q8N1I8 211 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 IWS1Q96ST2 819 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 RNF26Q9BY78 433 aaPredicted RBP10.84□□□□□ -0.67
CLCN3-205ENST00000506924 IGFLR1Q9H665 355 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 RIC8AQ9NPQ8 531 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 MAP3K20Q9NYL2 800 aaKnown RBP10.84□□□□□ -0.67
CLCN3-205ENST00000506924 PCDHA6Q9UN73 950 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 PCDHA8Q9Y5H6 950 aa10.84□□□□□ -0.67
CLCN3-205ENST00000506924 TNRC18O15417 2968 aaPredicted RBP10.83□□□□□ -0.68
CLCN3-205ENST00000506924 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 SPDYE3A6NKU9 549 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 SHISA8B8ZZ34 492 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 DNM1LO00429 736 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 EIF3JO75822 258 aaKnown RBP10.83□□□□□ -0.68
CLCN3-205ENST00000506924 CCND2P30279 289 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 TBC1D8BQ0IIM8 1120 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 ST3GAL1Q11201 340 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
CLCN3-205ENST00000506924 KCNA10Q16322 511 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 ALG1LQ6GMV1 187 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 C20orf204Q6ZNR8 217 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 RNF180Q86T96 592 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 VSIG10LQ86VR7 867 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 CCDC83Q8IWF9 413 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 SAMD3Q8N6K7 520 aa10.83□□□□□ -0.68
CLCN3-205ENST00000506924 CEP120Q8N960 986 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms