RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 TCP11Q8WWU5 503 aa22.14■■□□□ 1.13
SNX25-204ENST00000506896 GPR32O75388 356 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 GJB5O95377 273 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 CA3P07451 260 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 EMC2Q15006 297 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 KIZQ2M2Z5 673 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 PPP2R2DQ66LE6 453 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 TMCO2Q7Z6W1 182 aaPredicted RBP22.13■■□□□ 1.13
SNX25-204ENST00000506896 PRDM12Q9H4Q4 367 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 SUCLA2Q9P2R7 463 aaPredicted RBP22.13■■□□□ 1.13
SNX25-204ENST00000506896 GINS2Q9Y248 185 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 A0A0C4DFX4 3053 aa22.13■■□□□ 1.13
SNX25-204ENST00000506896 ARHGEF15O94989 841 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 FOSL2P15408 326 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 GPC3P51654 580 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 NLRP11P59045 1033 aaKnown RBP22.12■■□□□ 1.13
SNX25-204ENST00000506896 PAK2Q13177 524 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 ATL3Q6DD88 541 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 PSPC1Q8WXF1 523 aaKnown RBP22.12■■□□□ 1.13
SNX25-204ENST00000506896 USP28Q96RU2 1077 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 MTRQ99707 1265 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 NT5C3AQ9H0P0 336 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 ATP6V0A4Q9HBG4 840 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 KIAA1024Q9UPX6 916 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 ARID2Q68CP9 1835 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 UNC80Q8N2C7 3258 aa22.12■■□□□ 1.13
SNX25-204ENST00000506896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.11■■□□□ 1.13
SNX25-204ENST00000506896 PP2D1A8MPX8 630 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 TLL1O43897 1013 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 NASPP49321 788 aaPredicted RBP22.11■■□□□ 1.13
SNX25-204ENST00000506896 TAP1Q03518 808 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 DRP2Q13474 957 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 PKP1Q13835 747 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 SLC39A14Q15043 492 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 ZNF410Q86VK4 478 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 SCLT1Q96NL6 688 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 RAD9AQ99638 391 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 FTHL17Q9BXU8 183 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 ADAMTS10Q9H324 1103 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 DDX19AQ9NUU7 478 aaKnown RBP22.11■■□□□ 1.13
SNX25-204ENST00000506896 DNM3Q9UQ16 869 aa22.11■■□□□ 1.13
SNX25-204ENST00000506896 ARHGEF35A5YM69 484 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 GPR182O15218 404 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 ASAP2O43150 1006 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 RPS6KA5O75582 802 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 CDC25AP30304 524 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 UBA7P41226 1012 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 CEBPZQ03701 1054 aaKnown RBP22.1■■□□□ 1.13
SNX25-204ENST00000506896 ADGRE1Q14246 886 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 ECM1Q16610 540 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 HYIQ5T013 277 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 FOXD4L5Q5VV16 416 aaPredicted RBP22.1■■□□□ 1.13
SNX25-204ENST00000506896 MCPH1Q8NEM0 835 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 MAFAQ8NHW3 353 aaPredicted RBP22.1■■□□□ 1.13
SNX25-204ENST00000506896 NLRP7Q8WX94 980 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 FOXD4L4Q8WXT5 416 aaPredicted RBP22.1■■□□□ 1.13
SNX25-204ENST00000506896 CDK5RAP3Q96JB5 506 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 OSMRQ99650 979 aa22.1■■□□□ 1.13
SNX25-204ENST00000506896 MMTAG2Q9BU76 263 aaKnown RBP22.1■■□□□ 1.13
SNX25-204ENST00000506896 AGO3Q9H9G7 860 aaKnown RBP22.1■■□□□ 1.13
SNX25-204ENST00000506896 SRPRBQ9Y5M8 271 aaKnown RBP22.1■■□□□ 1.13
SNX25-204ENST00000506896 LCHNA4D1U4 455 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 BRD1O95696 1058 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 EIF4BP23588 611 aaKnown RBP22.09■■□□□ 1.13
SNX25-204ENST00000506896 CD52P31358 61 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 MXD4Q14582 209 aaPredicted RBP22.09■■□□□ 1.13
SNX25-204ENST00000506896 CABP7Q86V35 215 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 RHPN2Q8IUC4 686 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 SLC17A8Q8NDX2 589 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 TMEM40Q8WWA1 233 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 TOP1MTQ969P6 601 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 TMEM143Q96AN5 459 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 PPP1R16BQ96T49 567 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 GAS2L1Q99501 681 aaPredicted RBP22.09■■□□□ 1.13
SNX25-204ENST00000506896 ZBED2Q9BTP6 218 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 CDHR5Q9HBB8 845 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 PADI3Q9ULW8 664 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 COL4A3BPQ9Y5P4 624 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 MYH15Q9Y2K3 1946 aa22.09■■□□□ 1.13
SNX25-204ENST00000506896 TTC3P53804 2025 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 A0A087WWV3 80 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 YEATS4O95619 227 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 AMHP03971 560 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 MARCKSP29966 332 aaPredicted RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 HTRA4P83105 476 aaPredicted RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 STK38Q15208 465 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 PADI6Q6TGC4 694 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 LINC00301Q8NCQ3 95 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 PRPF31Q8WWY3 499 aaKnown RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 CALML4Q96GE6 196 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 GCOM2Q9BZD3 368 aaPredicted RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 INO80BQ9C086 356 aaPredicted RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 BHMT2Q9H2M3 363 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 XPNPEP1Q9NQW7 623 aa22.08■■□□□ 1.13
SNX25-204ENST00000506896 BMP2KQ9NSY1 1161 aaPredicted RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 FBXO2Q9UK22 296 aaPredicted RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 NOC2LQ9Y3T9 749 aaKnown RBP22.08■■□□□ 1.13
SNX25-204ENST00000506896 USO1O60763 962 aaKnown RBP22.07■■□□□ 1.12
SNX25-204ENST00000506896 EYA4O95677 639 aa22.07■■□□□ 1.12
SNX25-204ENST00000506896 DARSP14868 501 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms