RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 MYOCDQ8IZQ8 938 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 DBF4BQ8NFT6 615 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 INTS4Q96HW7 963 aaKnown RBP14.68□□□□□ -0.06
TCOF1-209ENST00000506630 SAMD11Q96NU1 681 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 EIF2AK1Q9BQI3 630 aaKnown RBP14.68□□□□□ -0.06
TCOF1-209ENST00000506630 C17orf80Q9BSJ5 609 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 RGL1Q9NZL6 768 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 GINS2Q9Y248 185 aa14.68□□□□□ -0.06
TCOF1-209ENST00000506630 COL4A4P53420 1690 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-209ENST00000506630 MUC6Q6W4X9 2439 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 MYH11P35749 1972 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 DCXO43602 365 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 STBD1O95210 358 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 TECP42680 631 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 PLEKHG4Q58EX7 1191 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 EFCAB12Q6NXP0 572 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 EP400NLQ6ZTU2 488 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 TPH2Q8IWU9 490 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 NME8Q8N427 588 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 LRRC71Q8N4P6 559 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 NEK9Q8TD19 979 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 SEPT8Q92599 483 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 MAP7D2Q96T17 732 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 NIFKQ9BYG3 293 aaKnown RBP14.67□□□□□ -0.06
TCOF1-209ENST00000506630 IFIH1Q9BYX4 1025 aaKnown RBP14.67□□□□□ -0.06
TCOF1-209ENST00000506630 ZSWIM4Q9H7M6 989 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 WRAP73Q9P2S5 460 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-209ENST00000506630 AKT3Q9Y243 479 aa14.67□□□□□ -0.06
TCOF1-209ENST00000506630 TTC3P53804 2025 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 H3BQ06 376 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-209ENST00000506630 VTNP04004 478 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 HSP90AA1P07900 732 aaKnown RBP14.66□□□□□ -0.06
TCOF1-209ENST00000506630 TMOD1P28289 359 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 MRE11P49959 708 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 HTRA4P83105 476 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-209ENST00000506630 PTGDRQ13258 359 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 LPIN1Q14693 890 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 TARBP2Q15633 366 aaKnown RBP14.66□□□□□ -0.06
TCOF1-209ENST00000506630 FBXO47Q5MNV8 452 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 TSHZ1Q6ZSZ6 1077 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 ANO5Q75V66 913 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 KIAA0319LQ8IZA0 1049 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 APBB2Q92870 758 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 CELF4Q9BZC1 486 aaKnown RBP14.66□□□□□ -0.06
TCOF1-209ENST00000506630 KCNH6Q9H252 994 aa14.66□□□□□ -0.06
TCOF1-209ENST00000506630 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.66□□□□□ -0.06
TCOF1-209ENST00000506630 SLITRK3O94933 977 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 YWHABP31946 246 aaKnown RBP14.65□□□□□ -0.06
TCOF1-209ENST00000506630 NPEPPSP55786 919 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 GPM6BQ13491 265 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 EPC2Q52LR7 807 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 FERMT3Q86UX7 667 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 C4orf19Q8IY42 314 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 LINC01465Q8N7H1 131 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 ERMNQ8TAM6 284 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-209ENST00000506630 PABPC5Q96DU9 382 aaKnown RBP14.65□□□□□ -0.06
TCOF1-209ENST00000506630 CEP170P1Q96L14 293 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
TCOF1-209ENST00000506630 YME1L1Q96TA2 773 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 OSMRQ99650 979 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 CYP26B1Q9NR63 512 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 PRKAG3Q9UGI9 489 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 BRWD1Q9NSI6 2320 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 KDM3AQ9Y4C1 1321 aa14.65□□□□□ -0.06
TCOF1-209ENST00000506630 H3BNC9 293 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 LAD1O00515 517 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 SYT1P21579 422 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 CD52P31358 61 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.075e-7■■■□□ 17
TCOF1-209ENST00000506630 POLGP54098 1239 aaPredicted RBP14.64□□□□□ -0.07
TCOF1-209ENST00000506630 PAK2Q13177 524 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 KIZQ2M2Z5 673 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 XKR9Q5GH70 373 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 HAUS3Q68CZ6 603 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 OTUD6AQ7L8S5 288 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 BRAPQ7Z569 592 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 C4orf32Q8N8J7 132 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 SCLT1Q96NL6 688 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 CEP89Q96ST8 783 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 HSD17B14Q9BPX1 270 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 RAB34Q9BZG1 259 aa14.64□□□□□ -0.07
TCOF1-209ENST00000506630 AGO3Q9H9G7 860 aaKnown RBP14.64□□□□□ -0.07
TCOF1-209ENST00000506630 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
TCOF1-209ENST00000506630 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-209ENST00000506630 MAFO75444 373 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-209ENST00000506630 DNM2P50570 870 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 NHLH1Q02575 133 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 DRP2Q13474 957 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 TCEAL5Q5H9L2 206 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 TMEM192Q8IY95 271 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
TCOF1-209ENST00000506630 SLC7A3Q8WY07 619 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 ZNF668Q96K58 619 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-209ENST00000506630 JPH2Q9BR39 696 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-209ENST00000506630 NSUN3Q9H649 340 aaKnown RBP14.63□□□□□ -0.07
TCOF1-209ENST00000506630 CDHR5Q9HBB8 845 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 TUFT1Q9NNX1 390 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 PPME1Q9Y570 386 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms