RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	HAX1	O00165	279 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	EDIL3	O43854	480 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	MMP1	P03956	469 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	CD44	P16070	742 aa	Known RBP	11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	KCNA5	P22460	613 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	QARS	P47897	775 aa	Known RBP	11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	PPP2R5C	Q13362	524 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	NPY5R	Q15761	445 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	UGCG	Q16739	394 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	LEXM	Q3ZCV2	418 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	FAM228A	Q86W67	206 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	ABI1	Q8IZP0	508 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	TMEM40	Q8WWA1	233 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	GJA10	Q969M2	543 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	PABPC5	Q96DU9	382 aa	Known RBP	11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	ELAC1	Q9H777	363 aa	Known RBP	11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	CDHR5	Q9HBB8	845 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	TMEM161A	Q9NX61	479 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	DACT1	Q9NYF0	836 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	PPME1	Q9Y570	386 aa		11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	MRPL42	Q9Y6G3	142 aa	Known RBP	11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	TBKBP1	A7MCY6	615 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018		C9IYK1	514 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	SLC37A4	O43826	429 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	P4HB	P07237	508 aa	Known RBP	11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	SFPQ	P23246	707 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	GPC3	P51654	580 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	SAFB	Q15424	915 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	ME3	Q16798	604 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	TCEAL5	Q5H9L2	206 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	OTUD6A	Q7L8S5	288 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	CRIPAK	Q8N1N5	446 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	LINC01465	Q8N7H1	131 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	SLC7A3	Q8WY07	619 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	KCNMB3	Q9NPA1	279 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	PLAGL2	Q9UPG8	496 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	PLXNA4	Q9HCM2	1894 aa		11.68	□□□□□ -0.54
NR1I3-222	ENST00000506018	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	FSD2	A1L4K1	749 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	RBAK-RBAKDN	I3L0D1	243 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	GRM6	O15303	877 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	CTDNEP1	O95476	244 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	SEC24B	O95487	1268 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	SKI	P12755	728 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	DARS	P14868	501 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	UBE3A	Q05086	875 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	TARBP2	Q15633	366 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	B3GNT9	Q6UX72	402 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	ZNF410	Q86VK4	478 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	NECAB1	Q8N987	351 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	RSPH1	Q8WYR4	309 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	ADAMTS10	Q9H324	1103 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	ALG13	Q9NP73	1137 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	CHST12	Q9NRB3	414 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	CLDND1	Q9NY35	253 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	ARID2	Q68CP9	1835 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	XIRP2	A4UGR9	3374 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	CARNS1	A5YM72	827 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	GAS2	O43903	313 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	MGEA5	O60502	916 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	MAF	O75444	373 aa	Predicted RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	LINC00271	P0C7V0	271 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	LAG3	P18627	525 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	POLG	P54098	1239 aa	Predicted RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	EPHA7	Q15375	998 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	NCAPH2	Q6IBW4	605 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	RHPN2	Q8IUC4	686 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	THNSL1	Q8IYQ7	743 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	LRRC43	Q8N309	656 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	KLHL23	Q8NBE8	558 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	NSUN7	Q8NE18	718 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	OXER1	Q8TDS5	423 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	CEP170P1	Q96L14	293 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	CCDC43	Q96MW1	224 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	C1QTNF1	Q9BXJ1	281 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	TMEM117	Q9H0C3	514 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	ZSWIM4	Q9H7M6	989 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	CYP26B1	Q9NR63	512 aa		11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	PUF60	Q9UHX1	559 aa	Known RBP	11.67	□□□□□ -0.54
NR1I3-222	ENST00000506018	IGKV6-21	A0A0C4DH24	114 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	CSPG5	O95196	566 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	EOMES	O95936	686 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	ITGB1	P05556	798 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	PPM1A	P35813	382 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	RFC5	P40937	340 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	RBM25	P49756	843 aa	Known RBP	11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	FAM189B	P81408	668 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	DSC3	Q14574	896 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	CALCRL	Q16602	461 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	FAM102B	Q5T8I3	360 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	PDE12	Q6L8Q7	609 aa	Known RBP	11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	C4orf19	Q8IY42	314 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	DIS3L2	Q8IYB7	885 aa	Known RBP	11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	RNF169	Q8NCN4	708 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	SPPL3	Q8TCT6	385 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	NEK9	Q8TD19	979 aa		11.66	□□□□□ -0.54
NR1I3-222	ENST00000506018	MICAL1	Q8TDZ2	1067 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms