RNA–Protein interactions for RNA: ENST00000505587.5

CCNH-205, Transcript of cyclin H, human

TSL 2

Gene CCNH, Length 1,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-205	ENST00000505587	ACAP1	Q15027	740 aa		4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	GAGE13	Q4V321	117 aa		4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	BCL6B	Q8N143	479 aa	Predicted RBP	4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	ANKRD53	Q8N9V6	530 aa		4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	PTPRN2	Q92932	1015 aa		4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	CYP4F11	Q9HBI6	524 aa		4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	PCDHA8	Q9Y5H6	950 aa		4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	RBM8A	Q9Y5S9	174 aa	Known RBP	4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	COX11	Q9Y6N1	276 aa		4.14	□□□□□ -1.75
CCNH-205	ENST00000505587	KIAA0355	O15063	1070 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	IPO13	O94829	963 aa	Known RBP	4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	KRTAP10-9	P60411	292 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	GUCY1A3	Q02108	690 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.13	□□□□□ -1.75	3e-9	■□□□□ 9.3
CCNH-205	ENST00000505587	SYNPO2L	Q9H987	977 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	SMURF1	Q9HCE7	757 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	HS3ST4	Q9Y661	456 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	C2orf78	A6NCI8	922 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	ARVCF	O00192	962 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	KCNK3	O14649	394 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	FOXP2	O15409	715 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	SRGAP2C	P0DJJ0	459 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	SEC23A	Q15436	765 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	DDR2	Q16832	855 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	TIGD2	Q4W5G0	525 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	EPHA10	Q5JZY3	1008 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	PGBD4	Q96DM1	585 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	ZNF408	Q9H9D4	720 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	IL23A	Q9NPF7	189 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	KCNH7	Q9NS40	1196 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	RCAN3	Q9UKA8	241 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	DENND2A	Q9ULE3	1009 aa		4.13	□□□□□ -1.75
CCNH-205	ENST00000505587	CCDC66	A2RUB6	948 aa		4.12	□□□□□ -1.75
CCNH-205	ENST00000505587	GOLGA6L22	H0YM25	854 aa		4.12	□□□□□ -1.75
CCNH-205	ENST00000505587	NR4A1	P22736	598 aa		4.12	□□□□□ -1.75
CCNH-205	ENST00000505587	ADAM8	P78325	824 aa		4.12	□□□□□ -1.75
CCNH-205	ENST00000505587	TCIRG1	Q13488	830 aa		4.12	□□□□□ -1.75
CCNH-205	ENST00000505587	TMCO4	Q5TGY1	634 aa		4.12	□□□□□ -1.75
CCNH-205	ENST00000505587	NAIF1	Q69YI7	327 aa	Predicted RBP	4.12	□□□□□ -1.75
CCNH-205	ENST00000505587	SCD	O00767	359 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	RECQL4	O94761	1208 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	DNM2	P50570	870 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	PLEKHG4	Q58EX7	1191 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	PAPD7	Q5XG87	772 aa	Known RBP	4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	RD3	Q7Z3Z2	195 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	CELF2-AS1	Q8N7Q2	184 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	MB21D1	Q8N884	522 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	MDGA1	Q8NFP4	955 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	ARL8A	Q96BM9	186 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	C16orf92	Q96LL3	132 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	GRXCR1	A8MXD5	290 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	SDHA	P31040	664 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	GNL2	Q13823	731 aa	Known RBP	4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	NBPF6	Q5VWK0	638 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	C1QL3	Q5VWW1	255 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	KRT40	Q6A162	431 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	BEND2	Q8NDZ0	799 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	CPT1C	Q8TCG5	803 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	NBPF4	Q96M43	638 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	FAM193B	Q96PV7	902 aa	Predicted RBP	4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	SORCS3	Q9UPU3	1222 aa		4.11	□□□□□ -1.75
CCNH-205	ENST00000505587	VSIG10L2	P0DP72	767 aa		4.1	□□□□□ -1.75
CCNH-205	ENST00000505587	LAG3	P18627	525 aa		4.1	□□□□□ -1.75
CCNH-205	ENST00000505587	USP14	P54578	494 aa		4.1	□□□□□ -1.75
CCNH-205	ENST00000505587	NOSTRIN	Q8IVI9	506 aa		4.1	□□□□□ -1.75
CCNH-205	ENST00000505587	SUPT20H	Q8NEM7	779 aa		4.1	□□□□□ -1.75
CCNH-205	ENST00000505587	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.1	□□□□□ -1.75
CCNH-205	ENST00000505587	ZNF512	Q96ME7	567 aa	Predicted RBP	4.1	□□□□□ -1.75
CCNH-205	ENST00000505587	CLK3	P49761	638 aa	Known RBP	4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	ALDH6A1	Q02252	535 aa	Known RBP	4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	PLA2G15	Q8NCC3	412 aa		4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	ST8SIA2	Q92186	375 aa		4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	NELL1	Q92832	810 aa		4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	ZNF669	Q96BR6	464 aa	Predicted RBP	4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	MRRF	Q96E11	262 aa	Known RBP	4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	IPO9	Q96P70	1041 aa	Known RBP	4.09	□□□□□ -1.75
CCNH-205	ENST00000505587	RASSF10	A6NK89	507 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	TRIM24	O15164	1050 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	APP	P05067	770 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	JUN	P05412	331 aa	Known RBP	4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	GNAT2	P19087	354 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	SUMO1	P63165	101 aa	Known RBP	4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	DGKD	Q16760	1214 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	DLG3	Q92796	817 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	CDC6	Q99741	560 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	FOXB1	Q99853	325 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	MAGEL2	Q9UJ55	1249 aa		4.09	□□□□□ -1.76
CCNH-205	ENST00000505587	SCAF4	O95104	1147 aa	Known RBP	4.08	□□□□□ -1.76
CCNH-205	ENST00000505587	GYPE	P15421	78 aa		4.08	□□□□□ -1.76
CCNH-205	ENST00000505587	GABRE	P78334	506 aa		4.08	□□□□□ -1.76
CCNH-205	ENST00000505587	FBXO42	Q6P3S6	717 aa		4.08	□□□□□ -1.76
CCNH-205	ENST00000505587	ANKS3	Q6ZW76	656 aa		4.08	□□□□□ -1.76
CCNH-205	ENST00000505587	ERCC4	Q92889	916 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms