RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 REC8O95072 547 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 EOMESO95936 686 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 FGFR1P11362 822 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 SKIP12755 728 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 CLCN3P51790 818 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 NLRP5P59047 1200 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 DSC3Q14574 896 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 TMEM184AQ6ZMB5 413 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 ALYREFQ86V81 257 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 SUGP1Q8IWZ8 645 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 RASGRP4Q8TDF6 673 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 KCNB2Q92953 911 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 PBXIP1Q96AQ6 731 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 MRPL9Q9BYD2 267 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 INO80BQ9C086 356 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 ENTPD7Q9NQZ7 604 aa12.54□□□□□ -0.4
UBE2D3-219ENST00000505207 FSCN2O14926 492 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 GLP2RO95838 553 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 IFNAR1P17181 557 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 HSPA4P34932 840 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 ALDH7A1P49419 539 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 ERVFC1P60507 584 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 LRCH2Q5VUJ6 765 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 KCNT2Q6UVM3 1135 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 TRIM67Q6ZTA4 783 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 PHKBQ93100 1093 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 FBXL18Q96ME1 805 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 CASD1Q96PB1 797 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 GCOM2Q9BZD3 368 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 ADAMTS10Q9H324 1103 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 CWH43Q9H720 699 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 NID2Q14112 1375 aa12.53□□□□□ -0.4
UBE2D3-219ENST00000505207 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 M0R296 226 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 CPLX1O14810 134 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 MSH4O15457 936 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 CPA1P15085 419 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 TECP42680 631 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 GPC3P51654 580 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 ZXDAP98168 799 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 PRKCEQ02156 737 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 NHLH1Q02575 133 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 SMC1AQ14683 1233 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 XKR3Q5GH77 459 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 PLPP4Q5VZY2 271 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 GALNT17Q6IS24 598 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 CES5AQ6NT32 575 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 EXOC8Q8IYI6 725 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 LRRC71Q8N4P6 559 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 CASP10Q92851 521 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 SLC5A5Q92911 643 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 IRF2BPLQ9H1B7 796 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 NR2E1Q9Y466 385 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 EVPLQ92817 2033 aa12.52□□□□□ -0.41
UBE2D3-219ENST00000505207 LOXHD1Q8IVV2 1947 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 CHMP2AO43633 222 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 DKC1O60832 514 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 MRE11P49959 708 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 NTRK3Q16288 839 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 Q4G0T1 1027 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 ANKRD54Q6NXT1 300 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 MIER3Q7Z3K6 550 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 ZBTB33Q86T24 672 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 LINC01465Q8N7H1 131 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 SUSD6Q92537 303 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 LENG9Q96B70 501 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 NECTIN4Q96NY8 510 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 NIFKQ9BYG3 293 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
UBE2D3-219ENST00000505207 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-219ENST00000505207 ZNF862O60290 1169 aa12.5□□□□□ -0.41
UBE2D3-219ENST00000505207 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
UBE2D3-219ENST00000505207 SFPQP23246 707 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■□□□□ 10.5
UBE2D3-219ENST00000505207 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-219ENST00000505207 PTPN5P54829 565 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms