RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 POU5F1Q01860 360 aaKnown RBP9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 DRP2Q13474 957 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 PLA2G4FQ68DD2 849 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 CDC25AP30304 524 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 NAMPTP43490 491 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 MBTD1Q05BQ5 628 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 PLEKHG4Q58EX7 1191 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 KIFAP3Q92845 792 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 ATP6V0A4Q9HBG4 840 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 PKD2L1Q9P0L9 805 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 PTPRDP23468 1912 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 RHOBTB3O94955 611 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 EDN1P05305 212 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 CLTBP09497 229 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 LIG1P18858 919 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 CRYBB1P53674 252 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 FAM189BP81408 668 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 ZNF200P98182 395 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 PTGISQ16647 500 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 USP38Q8NB14 1042 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 ASAP3Q8TDY4 903 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 TCP11Q8WWU5 503 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 FUCA2Q9BTY2 467 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 TRMT13Q9NUP7 481 aaKnown RBP9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 SETD4Q9NVD3 440 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 DNM3Q9UQ16 869 aa9.22□□□□□ -0.93
CDC42SE2-208ENST00000505065 CHMP2AO43633 222 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 IQCF3P0C7M6 154 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 KLRC1P26715 233 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 ABCD1P33897 745 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 PTENP60484 403 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 MRPS6P82932 125 aaKnown RBP9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 CAPSQ13938 189 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 PADI6Q6TGC4 694 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 IQUBQ8NA54 791 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 CCDC39Q9UFE4 941 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 NR1I2O75469 434 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 ZNF202O95125 648 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 C12orf56Q8IXR9 622 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 TNS4Q8IZW8 715 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 REEP2Q9BRK0 252 aa9.21□□□□□ -0.93
CDC42SE2-208ENST00000505065 CNTNAP2Q9UHC6 1331 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 EIF3DO15371 548 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 GTPBP6O43824 516 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 EFEMP2O95967 443 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 PFKMP08237 780 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 PLS3P13797 630 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 MCM4P33991 863 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 NPEPPSP55786 919 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 MXD4Q14582 209 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 FBXO47Q5MNV8 452 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 UNC13DQ70J99 1090 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 TPH2Q8IWU9 490 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 CALML4Q96GE6 196 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 TRPV6Q9H1D0 765 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 NBNO60934 754 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 ZCWPW2Q504Y3 356 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 XKR4Q5GH76 650 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 C16orf59Q7L2K0 433 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 SRGAP1Q7Z6B7 1085 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 C7orf31Q8N865 590 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 SLC17A8Q8NDX2 589 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 TMEM161BQ8NDZ6 487 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 OSBPL7Q9BZF2 842 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 TMX1Q9H3N1 280 aa9.21□□□□□ -0.94
CDC42SE2-208ENST00000505065 VWA8A3KMH1 1905 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 ECM2O94769 699 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 CYP4A11Q02928 519 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 MCM6Q14566 821 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 UTP14CQ5TAP6 766 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 MFSD5Q6N075 450 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 ZNF507Q8TCN5 953 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 PIGOQ8TEQ8 1089 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 TRAPPC12Q8WVT3 735 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 TMEM40Q8WWA1 233 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 LINC01599Q8WXQ3 324 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 BHMT2Q9H2M3 363 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 CLSTN2Q9H4D0 955 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 TRPV2Q9Y5S1 764 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 GAP43P17677 238 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 UBA7P41226 1012 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 SNRPFP62306 86 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 LAMTOR4Q0VGL1 99 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 PSMD2Q13200 908 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 LPIN1Q14693 890 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 RRAGBQ5VZM2 374 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 KANK3Q6NY19 840 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 MRPL10Q7Z7H8 261 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 LRRC27Q9C0I9 530 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 TCEAL9Q9UHQ7 104 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 POLR2DO15514 142 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 LINC00271P0C7V0 271 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 DARSP14868 501 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 SELPP16109 830 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 BMP6P22004 513 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 ME1P48163 572 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 SPECC1Q5M775 1068 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 EFCAB12Q6NXP0 572 aa9.2□□□□□ -0.94
CDC42SE2-208ENST00000505065 PRIMPOLQ96LW4 560 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms