RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 CTNNAL1Q9UBT7 734 aa8.4□□□□□ -1.06
ATP2C1-208ENST00000504948 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
ATP2C1-208ENST00000504948 RBMX2Q9Y388 322 aaKnown RBP8.4□□□□□ -1.06
ATP2C1-208ENST00000504948 A0A087X0T9 212 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 LOC100653049A0A140TA62 436 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 KIF3CO14782 793 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 XPO1O14980 1071 aaKnown RBP8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 KRT34O76011 436 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 FAM228BP0C875 321 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 EPHB2P29323 1055 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 FLT3P36888 993 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 MCAMP43121 646 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 WDR93Q6P2C0 686 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 FBXO25Q8TCJ0 367 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 C6orf50Q9HD87 102 aa8.4□□□□□ -1.07
ATP2C1-208ENST00000504948 NVLO15381 856 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 FMNL1O95466 1100 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ENO1P06733 434 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 NQO1P15559 274 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 IL9RQ01113 521 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 EXOSC10Q01780 885 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 BIRC3Q13489 604 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 VWA3BQ502W6 1294 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SGO2Q562F6 1265 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 AADACL2Q6P093 401 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 USP17L2Q6R6M4 530 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TMEM139Q8IV31 216 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 GALNT4Q8N4A0 578 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SLC44A5Q8NCS7 719 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 PPWD1Q96BP3 646 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 PLCB1Q9NQ66 1216 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ZFP69BQ9UJL9 534 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 AGTPBP1Q9UPW5 1226 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 NCF2P19878 526 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TCN1P20061 433 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 CCNE1P24864 410 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SLC16A2P36021 539 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 KCNMA1Q12791 1236 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 KCNB2Q92953 911 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 MXD3Q9BW11 206 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SEMA4AQ9H3S1 761 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 PIDD1Q9HB75 910 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 MICAL3Q7RTP6 2002 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ATP2A1O14983 1001 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 EPB41P11171 864 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 IFNAR1P17181 557 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TOB1P50616 345 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TPD52P55327 224 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ARHGAP4P98171 946 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 NONOQ15233 471 aaKnown RBP eCLIP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 UBE2SQ16763 222 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TTBK2Q6IQ55 1244 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 MB21D2Q8IYB1 491 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ARHGAP18Q8N392 663 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TMX4Q9H1E5 349 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 CARD9Q9H257 536 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TSPYL2Q9H2G4 693 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 SMYD2Q9NRG4 433 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 TRPC5Q9UL62 973 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 USP15Q9Y4E8 981 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 EPHB6O15197 1021 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ZBED4O75132 1171 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 BBS9Q3SYG4 887 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 IYDQ6PHW0 289 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 PNMA1Q8ND90 353 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ZNF653Q96CK0 615 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 PWWP2AQ96N64 755 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 COPRSQ9NQ92 184 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 DISC1Q9NRI5 854 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 ADAMTSL1Q8N6G6 1762 aa8.39□□□□□ -1.07
ATP2C1-208ENST00000504948 A0A1B0GVG6 124 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 PGM3O95394 542 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 STARD3NLO95772 234 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 KRT16P08779 473 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 ATF2P15336 505 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 YWHAGP61981 247 aaKnown RBP eCLIP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 PRAMEP78395 509 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 TRAF1Q13077 416 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 MAN2A1Q16706 1144 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 RASSF3Q86WH2 238 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 DNAJC10Q8IXB1 793 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 LPIN2Q92539 896 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 THTPAQ9BU02 230 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 CRNKL1Q9BZJ0 848 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 SLC13A1Q9BZW2 595 aa8.38□□□□□ -1.07
ATP2C1-208ENST00000504948 SH2D4AQ9H788 454 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms