RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GAS8O95995 478 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 SLC9A1P19634 815 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 SNX16P57768 344 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 PPP2R5DQ14738 602 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 BSPRYQ5W0U4 402 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 RINT1Q6NUQ1 792 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 CAPN12Q6ZSI9 719 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 EXOC8Q8IYI6 725 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 LRRC71Q8N4P6 559 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 PPP1R14CQ8TAE6 165 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 SEPT1Q8WYJ6 367 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 MAGOHBQ96A72 148 aaKnown RBP15.23■□□□□ 0.03
TCOF1-207ENST00000504761 WDR24Q96S15 920 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 DYNC1LI2O43237 492 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-207ENST00000504761 CYP2B6P20813 491 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-207ENST00000504761 RAB20Q9NX57 234 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
TCOF1-207ENST00000504761 SLIT2O94813 1529 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 A0A1W2PQC6 194 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 DGAT1O75907 488 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 RNF8O76064 485 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-207ENST00000504761 RABGGTAQ92696 567 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 AP1M1Q9BXS5 423 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 TNPO2O14787 897 aaKnown RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 PALMO75781 387 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 HOXA7P31268 230 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 SNX1Q13596 522 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 CCDC91Q7Z6B0 441 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 SYTL5Q8TDW5 730 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 LRRC45Q96CN5 670 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 PACSIN2Q9UNF0 486 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 GYPCP04921 128 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 RSPH3Q86UC2 560 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 MOV10L1Q9BXT6 1211 aaKnown RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 RBAKQ9NYW8 714 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 TFR2Q9UP52 801 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 CD2APQ9Y5K6 639 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 COL14A1Q05707 1796 aaKnown RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 NCK2O43639 380 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-207ENST00000504761 NACA2Q9H009 215 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 HSPBP1Q9NZL4 362 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 COMMD10Q9Y6G5 202 aa15.22■□□□□ 0.03
TCOF1-207ENST00000504761 CSPG5O95196 566 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.03
TCOF1-207ENST00000504761 OAS2P29728 719 aaKnown RBP15.21■□□□□ 0.03
TCOF1-207ENST00000504761 TMEM62Q0P6H9 643 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 ASB14A6NK59 587 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 ZBTB39O15060 712 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 EZRP15311 586 aaKnown RBP15.21■□□□□ 0.03
TCOF1-207ENST00000504761 BRD3Q15059 726 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 KRT71Q3SY84 523 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 KRT39Q6A163 491 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 HEXIM2Q96MH2 286 aaKnown RBP15.21■□□□□ 0.03
TCOF1-207ENST00000504761 TRIM10Q9UDY6 481 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 ODF2LQ9ULJ1 636 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 ZNF148Q9UQR1 794 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 GOLGA6CA6NDK9 693 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 GOLGA6DP0CG33 693 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 ADCY8P40145 1251 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 ERO1BQ86YB8 467 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 CCDC89Q8N998 374 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 EPB41L5Q9HCM4 733 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 GOLGA6AQ9NYA3 693 aa15.21■□□□□ 0.03
TCOF1-207ENST00000504761 GOLGA6L7A0A1B0GV03 622 aa15.21■□□□□ 0.02
TCOF1-207ENST00000504761 PHKA2P46019 1235 aa15.21■□□□□ 0.02
TCOF1-207ENST00000504761 NCAPHQ15003 741 aa15.21■□□□□ 0.02
TCOF1-207ENST00000504761 ZNF667Q5HYK9 610 aa15.21■□□□□ 0.02
TCOF1-207ENST00000504761 FRMD5Q7Z6J6 570 aa15.21■□□□□ 0.02
TCOF1-207ENST00000504761 CCDC63Q8NA47 563 aa15.21■□□□□ 0.02
TCOF1-207ENST00000504761 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.02
TCOF1-207ENST00000504761 PMS1P54277 932 aaKnown RBP15.2■□□□□ 0.02
TCOF1-207ENST00000504761 ACTR2P61160 394 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 FUT2Q10981 343 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 KRT81Q14533 505 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 HADHQ16836 314 aaKnown RBP15.2■□□□□ 0.02
TCOF1-207ENST00000504761 TWF2Q6IBS0 349 aaKnown RBP15.2■□□□□ 0.02
TCOF1-207ENST00000504761 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 FAM193BQ96PV7 902 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-207ENST00000504761 PARD6BQ9BYG5 372 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 KIAA1683Q9H0B3 1180 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 TXNDC16Q9P2K2 825 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 TMEM150BA6NC51 233 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 HEXIM1O94992 359 aaKnown RBP15.2■□□□□ 0.02
TCOF1-207ENST00000504761 KCNK18Q7Z418 384 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 RPUSD2Q8IZ73 545 aaKnown RBP15.2■□□□□ 0.02
TCOF1-207ENST00000504761 RAB17Q9H0T7 212 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 PLS3P13797 630 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 DYNLT1P63172 113 aa15.2■□□□□ 0.02
TCOF1-207ENST00000504761 ZSCAN20P17040 1043 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 ZRSR2Q15696 482 aaKnown RBP15.19■□□□□ 0.02
TCOF1-207ENST00000504761 DNAJC24Q6P3W2 148 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms