RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 PCDHB7Q9Y5E2 793 aa28.42■■■□□ 2.14
PVT1-201ENST00000504719 WNT7AO00755 349 aa28.41■■■□□ 2.14
PVT1-201ENST00000504719 MAFO75444 373 aaPredicted RBP28.41■■■□□ 2.14
PVT1-201ENST00000504719 TFF2Q03403 129 aa28.41■■■□□ 2.14
PVT1-201ENST00000504719 CALCRLQ16602 461 aa28.41■■■□□ 2.14
PVT1-201ENST00000504719 PLA2G4FQ68DD2 849 aa28.41■■■□□ 2.14
PVT1-201ENST00000504719 RNF216Q9NWF9 866 aaPredicted RBP28.41■■■□□ 2.14
PVT1-201ENST00000504719 ATG2AQ2TAZ0 1938 aa28.41■■■□□ 2.14
PVT1-201ENST00000504719 DARSP14868 501 aaKnown RBP28.4■■■□□ 2.14
PVT1-201ENST00000504719 FAM189BP81408 668 aa28.4■■■□□ 2.14
PVT1-201ENST00000504719 CDC42EP1Q00587 391 aa28.4■■■□□ 2.14
PVT1-201ENST00000504719 SAFBQ15424 915 aaKnown RBP eCLIP28.4■■■□□ 2.14
PVT1-201ENST00000504719 C4orf19Q8IY42 314 aa28.4■■■□□ 2.14
PVT1-201ENST00000504719 FBXO18Q8NFZ0 1043 aa28.4■■■□□ 2.14
PVT1-201ENST00000504719 HLA-CQ95604 372 aa28.4■■■□□ 2.14
PVT1-201ENST00000504719 CYP26B1Q9NR63 512 aa28.4■■■□□ 2.14
PVT1-201ENST00000504719 MRPL42Q9Y6G3 142 aaKnown RBP28.4■■■□□ 2.14
PVT1-201ENST00000504719 TCF20Q9UGU0 1960 aaKnown RBP28.4■■■□□ 2.14
PVT1-201ENST00000504719 IBSPP21815 317 aaPredicted RBP28.39■■■□□ 2.14
PVT1-201ENST00000504719 GATMP50440 423 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 DNM2P50570 870 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 NPEPPSP55786 919 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 PAN2Q504Q3 1202 aaKnown RBP28.39■■■□□ 2.14
PVT1-201ENST00000504719 NLRP7Q8WX94 980 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 DYDC2Q96IM9 177 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 SCLT1Q96NL6 688 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 JPH2Q9BR39 696 aaPredicted RBP28.39■■■□□ 2.14
PVT1-201ENST00000504719 LXNQ9BS40 222 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 C11orf84Q9BUA3 381 aaPredicted RBP28.39■■■□□ 2.14
PVT1-201ENST00000504719 RGL1Q9NZL6 768 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 CUL9Q8IWT3 2517 aa28.39■■■□□ 2.14
PVT1-201ENST00000504719 AAK1Q2M2I8 961 aa28.38■■■□□ 2.13
PVT1-201ENST00000504719 PLVAPQ9BX97 442 aa28.38■■■□□ 2.13
PVT1-201ENST00000504719 ELAC1Q9H777 363 aaKnown RBP28.38■■■□□ 2.13
PVT1-201ENST00000504719 SUCLA2Q9P2R7 463 aaPredicted RBP28.38■■■□□ 2.13
PVT1-201ENST00000504719 PCDHA12Q9UN75 941 aa28.38■■■□□ 2.13
PVT1-201ENST00000504719 PPME1Q9Y570 386 aa28.38■■■□□ 2.13
PVT1-201ENST00000504719 ARID2Q68CP9 1835 aa28.38■■■□□ 2.13
PVT1-201ENST00000504719 NEMFO60524 1076 aa28.37■■■□□ 2.13
PVT1-201ENST00000504719 ZNF579Q8NAF0 562 aaKnown RBP28.37■■■□□ 2.13
PVT1-201ENST00000504719 CEP170P1Q96L14 293 aa28.37■■■□□ 2.13
PVT1-201ENST00000504719 MTMR9Q96QG7 549 aa28.37■■■□□ 2.13
PVT1-201ENST00000504719 GCOM2Q9BZD3 368 aaPredicted RBP28.37■■■□□ 2.13
PVT1-201ENST00000504719 ZSWIM4Q9H7M6 989 aa28.37■■■□□ 2.13
PVT1-201ENST00000504719 TMEM161AQ9NX61 479 aa28.37■■■□□ 2.13
PVT1-201ENST00000504719 KIF3AQ9Y496 699 aa28.37■■■□□ 2.13
PVT1-201ENST00000504719 SLITRK3O94933 977 aa28.36■■■□□ 2.13
PVT1-201ENST00000504719 ZSCAN20P17040 1043 aaPredicted RBP28.36■■■□□ 2.13
PVT1-201ENST00000504719 GJB2P29033 226 aa28.36■■■□□ 2.13
PVT1-201ENST00000504719 YWHABP31946 246 aaKnown RBP28.36■■■□□ 2.13
PVT1-201ENST00000504719 CTTNQ14247 550 aaKnown RBP28.36■■■□□ 2.13
PVT1-201ENST00000504719 TIGD5Q53EQ6 642 aa28.36■■■□□ 2.13
PVT1-201ENST00000504719 FAM102BQ5T8I3 360 aa28.36■■■□□ 2.13
PVT1-201ENST00000504719 EIF2AK1Q9BQI3 630 aaKnown RBP28.36■■■□□ 2.13
PVT1-201ENST00000504719 LMAN2LQ9H0V9 348 aa28.36■■■□□ 2.13
PVT1-201ENST00000504719 FOXP1Q9H334 677 aaPredicted RBP28.36■■■□□ 2.13
PVT1-201ENST00000504719 TTC12Q9H892 705 aaPredicted RBP28.36■■■□□ 2.13
PVT1-201ENST00000504719 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.36■■■□□ 2.13
PVT1-201ENST00000504719 XIRP2A4UGR9 3374 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 BRWD1Q9NSI6 2320 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 A0A087WZ62 844 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 GRM6O15303 877 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 BMP1P13497 986 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 FGFR4P22455 802 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 TXKP42681 527 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 CYP4A11Q02928 519 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 OTUD6AQ7L8S5 288 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 ZNF410Q86VK4 478 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 RHPN2Q8IUC4 686 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 EXOC8Q8IYI6 725 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 P2RX5Q93086 422 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 FDXACB1Q9BRP7 624 aaPredicted RBP28.35■■■□□ 2.13
PVT1-201ENST00000504719 DHX33Q9H6R0 707 aaKnown RBP28.35■■■□□ 2.13
PVT1-201ENST00000504719 ATP6V0A4Q9HBG4 840 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 SMC3Q9UQE7 1217 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 MYO7AQ13402 2215 aa28.35■■■□□ 2.13
PVT1-201ENST00000504719 TBKBP1A7MCY6 615 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 CSDE1O75534 798 aaKnown RBP28.34■■■□□ 2.13
PVT1-201ENST00000504719 ATP2B1P20020 1258 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 KCNQ1P51787 676 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 NAALADL2Q58DX5 795 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 TPH2Q8IWU9 490 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 SLC7A3Q8WY07 619 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 HSD17B14Q9BPX1 270 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 TMEM60Q9H2L4 133 aa28.34■■■□□ 2.13
PVT1-201ENST00000504719 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.33■■■□□ 2.13
PVT1-201ENST00000504719 ZBTB39O15060 712 aa28.33■■■□□ 2.13
PVT1-201ENST00000504719 RFC5P40937 340 aa28.33■■■□□ 2.13
PVT1-201ENST00000504719 POLGP54098 1239 aaPredicted RBP28.33■■■□□ 2.13
PVT1-201ENST00000504719 CUL4AQ13619 759 aa28.33■■■□□ 2.13
PVT1-201ENST00000504719 KSR1Q8IVT5 923 aa28.33■■■□□ 2.13
PVT1-201ENST00000504719 ADAMTS19Q8TE59 1207 aa28.33■■■□□ 2.13
PVT1-201ENST00000504719 INO80BQ9C086 356 aaPredicted RBP28.33■■■□□ 2.13
PVT1-201ENST00000504719 NSUN3Q9H649 340 aaKnown RBP28.33■■■□□ 2.13
PVT1-201ENST00000504719 PLAGL2Q9UPG8 496 aa28.33■■■□□ 2.13
PVT1-201ENST00000504719 LYPLA2O95372 231 aa28.32■■■□□ 2.12
PVT1-201ENST00000504719 FGFR1P11362 822 aa28.32■■■□□ 2.12
PVT1-201ENST00000504719 MCM7P33993 719 aa28.32■■■□□ 2.12
PVT1-201ENST00000504719 GNL2Q13823 731 aaKnown RBP28.32■■■□□ 2.12
PVT1-201ENST00000504719 XKR9Q5GH70 373 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms