RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 OR52Z1P0C646 297 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TSPY3P0CV98 308 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TSPY8P0CW00 308 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TM4SF1P30408 202 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 CCT6AP40227 531 aaKnown RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 CLK1P49759 484 aaKnown RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 USP4Q13107 963 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 PABPC4Q13310 644 aaKnown RBP eCLIP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 PDIA5Q14554 519 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 SEPT2Q15019 361 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 NONOQ15233 471 aaKnown RBP eCLIP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TAF11Q15544 211 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 MSL1Q68DK7 614 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 FBXL19Q6PCT2 694 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 MAATS1Q7Z4T9 603 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 CCDC84Q86UT8 332 aaPredicted RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 SMYD4Q8IYR2 804 aaPredicted RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 LINC00116Q8NCU8 138 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 NEDD1Q8NHV4 660 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 P2RX5Q93086 422 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TRIM56Q9BRZ2 755 aaKnown RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 NOC4LQ9BVI4 516 aaKnown RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TSPAN10Q9H1Z9 355 aaPredicted RBP7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 TAB2Q9NYJ8 693 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 UBP1Q9NZI7 540 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 STK17AQ9UEE5 414 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 ACAD8Q9UKU7 415 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 HCN4Q9Y3Q4 1203 aa7.82□□□□□ -1.16
CSNK1A1-204ENST00000504676 hCG_1642624A0A1W2PR95 340 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 TTC26A0AVF1 554 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 ZPR1O75312 459 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 RPS6KA5O75582 802 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 CASP1P29466 404 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 OAS2P29728 719 aaKnown RBP7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 FKBP15Q5T1M5 1219 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 TBC1D9BQ66K14 1250 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 MZT2AQ6P582 158 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 ZNF572Q7Z3I7 529 aaPredicted RBP7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 ZNF804AQ7Z570 1209 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 CABP7Q86V35 215 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 USP33Q8TEY7 942 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 ACSBG1Q96GR2 724 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 NELL2Q99435 816 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 TUBGCP2Q9BSJ2 902 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 RAB34Q9BZG1 259 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 TRIM8Q9BZR9 551 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 TTYH3Q9C0H2 523 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 NUCKS1Q9H1E3 243 aaKnown RBP7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 CWC15Q9P013 229 aaKnown RBP7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 ZMYM5Q9UJ78 669 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 PPT2Q9UMR5 302 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 SAR1BQ9Y6B6 198 aa7.81□□□□□ -1.16
CSNK1A1-204ENST00000504676 COL24A1Q17RW2 1714 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 GPR75-ASB3A0A0A6YYF3 556 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 TMEM229AB2RXF0 380 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 SMIM22K7EJ46 135 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 NMT2O60551 498 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 SEC31AO94979 1220 aaKnown RBP7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 LCA5LO95447 670 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 HMGB2P26583 209 aaKnown RBP7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 PRDX5P30044 214 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 AARSP49588 968 aaKnown RBP eCLIP7.8□□□□□ -1.166e-8■■■■■ 30.9
CSNK1A1-204ENST00000504676 TBC1D8BQ0IIM8 1120 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 BIRC3Q13489 604 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 GRAPQ13588 217 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 PTPN21Q16825 1174 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 FAM133BQ5BKY9 247 aaKnown RBP7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 DACT2Q5SW24 774 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 CENPPQ6IPU0 288 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 NECAB2Q7Z6G3 386 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 NEK8Q86SG6 692 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 CSGALNACT2Q8N6G5 542 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 RASSF8Q8NHQ8 419 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 GRAPLQ8TC17 118 aaPredicted RBP7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 FAM71BQ8TC56 605 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 RRP36Q96EU6 259 aaKnown RBP7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 CALML4Q96GE6 196 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 TRIM47Q96LD4 638 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 TMEM47Q9BQJ4 181 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 IRX2Q9BZI1 471 aaPredicted RBP7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 TRIM9Q9C026 710 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 SLC5A4Q9NY91 659 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 GDAQ9Y2T3 454 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 DGKBQ9Y6T7 804 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 CCDC88AQ3V6T2 1871 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 FAM205AQ6ZU69 1335 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 C10orf71Q711Q0 1435 aa7.8□□□□□ -1.16
CSNK1A1-204ENST00000504676 KLRF2D3W0D1 207 aa7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 CYTH3O43739 400 aa7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 USO1O60763 962 aaKnown RBP7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 CPNE3O75131 537 aaKnown RBP7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 CYP2D6P10635 497 aa7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 GBP2P32456 591 aaPredicted RBP7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 USP14P54578 494 aa7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 ZNF280AP59817 542 aaPredicted RBP7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 LRRC63Q05C16 580 aa7.79□□□□□ -1.16
CSNK1A1-204ENST00000504676 HSP90B2PQ58FF3 399 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms