RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 QPCTQ16769 361 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 LRCH2Q5VUJ6 765 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 KRT40Q6A162 431 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 FAM117BQ6P1L5 589 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 MOXD1Q6UVY6 613 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 NEK8Q86SG6 692 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 SMAP1Q8IYB5 467 aaPredicted RBP9.04□□□□□ -0.96
RFC1-207ENST00000504554 LINC01599Q8WXQ3 324 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 RIT2Q99578 217 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 TEKT3Q9BXF9 490 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 MTIF3Q9H2K0 278 aaKnown RBP9.04□□□□□ -0.96
RFC1-207ENST00000504554 PRDM12Q9H4Q4 367 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 AGO3Q9H9G7 860 aaKnown RBP9.04□□□□□ -0.96
RFC1-207ENST00000504554 DDX25Q9UHL0 483 aaKnown RBP9.04□□□□□ -0.96
RFC1-207ENST00000504554 VAV3Q9UKW4 847 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 PCDHA2Q9Y5H9 948 aa9.04□□□□□ -0.96
RFC1-207ENST00000504554 UNC80Q8N2C7 3258 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 TMEM265A0A087WTH1 108 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 CCDC194A0A1B0GVG4 234 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 ABHD14A-ACY1A0A1B0GW23 586 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 WDR64B1ANS9 1081 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 RFXAPO00287 272 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 HBP1O60381 514 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 CCNT1O60563 726 aaKnown RBP9.03□□□□□ -0.96
RFC1-207ENST00000504554 GAS7O60861 476 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 PARNO95453 639 aaKnown RBP9.03□□□□□ -0.96
RFC1-207ENST00000504554 C22orf31O95567 290 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 PSAPP07602 524 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 SLC26A2P50443 739 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 MRPS6P82932 125 aaKnown RBP9.03□□□□□ -0.96
RFC1-207ENST00000504554 IKBKEQ14164 716 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 RAB30Q15771 203 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 FBXO47Q5MNV8 452 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 FAM160B1Q5W0V3 765 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 PPP4R3AQ6IN85 833 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 TAF2Q6P1X5 1199 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 DIS3L2Q8IYB7 885 aaKnown RBP9.03□□□□□ -0.96
RFC1-207ENST00000504554 KIAA0319LQ8IZA0 1049 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 LINC01465Q8N7H1 131 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 PHOSPHO2Q8TCD6 241 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 WASF1Q92558 559 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 CEP89Q96ST8 783 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 PPP1R16BQ96T49 567 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 SLC9A7Q96T83 725 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 SH2D3AQ9BRG2 576 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 CERS4Q9HA82 394 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 DISC1Q9NRI5 854 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 WRAP73Q9P2S5 460 aaPredicted RBP9.03□□□□□ -0.96
RFC1-207ENST00000504554 MSRAQ9UJ68 235 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 PCDHA11Q9Y5I1 949 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 XIRP2A4UGR9 3374 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 PTPRSQ13332 1948 aa9.03□□□□□ -0.96
RFC1-207ENST00000504554 SMIM35A0A1B0GVV1 85 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 KIF28PB7ZC32 967 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 GJB5O95377 273 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 XBP1P17861 261 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 CD52P31358 61 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 KCNJ6P48051 423 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 PRKCEQ02156 737 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 TAP1Q03518 808 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 RABEP1Q15276 862 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 ZNF484Q5JVG2 852 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 MIER3Q7Z3K6 550 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 RTN4RL1Q86UN2 441 aaPredicted RBP9.02□□□□□ -0.97
RFC1-207ENST00000504554 CKAP2LQ8IYA6 745 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 USP38Q8NB14 1042 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 TMEM40Q8WWA1 233 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 SEPT8Q92599 483 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 ZSCAN31Q96LW9 406 aaPredicted RBP9.02□□□□□ -0.97
RFC1-207ENST00000504554 TBC1D32Q96NH3 1257 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 IFIH1Q9BYX4 1025 aaKnown RBP9.02□□□□□ -0.97
RFC1-207ENST00000504554 SAMM50Q9Y512 469 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 TRPV2Q9Y5S1 764 aa9.02□□□□□ -0.97
RFC1-207ENST00000504554 PRUNE2Q8WUY3 3088 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 COL1A2P08123 1366 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 SIP14410 1827 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 ENPP3O14638 875 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 ZBTB39O15060 712 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 MGEA5O60502 916 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 GPR32O75388 356 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 VTNP04004 478 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 FOSL2P15408 326 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 CLCN3P51790 818 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 JAK3P52333 1124 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 PPP2R5CQ13362 524 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 DRP2Q13474 957 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 TARBP2Q15633 366 aaKnown RBP9.01□□□□□ -0.97
RFC1-207ENST00000504554 TMEM266Q2M3C6 531 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 ANO5Q75V66 913 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 MYOCDQ8IZQ8 938 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 LRRC71Q8N4P6 559 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 ZNF775Q96BV0 537 aaPredicted RBP9.01□□□□□ -0.97
RFC1-207ENST00000504554 THAP11Q96EK4 314 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 POM121Q96HA1 1249 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 TMX3Q96JJ7 454 aa9.01□□□□□ -0.97
RFC1-207ENST00000504554 ZNF668Q96K58 619 aaPredicted RBP9.01□□□□□ -0.97
RFC1-207ENST00000504554 LLPHQ9BRT6 129 aaKnown RBP9.01□□□□□ -0.97
RFC1-207ENST00000504554 CELF4Q9BZC1 486 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms