RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 LRRC71Q8N4P6 559 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 TMEM40Q8WWA1 233 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 SCLT1Q96NL6 688 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 IGFLR1Q9H665 355 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 RC3H2Q9HBD1 1191 aaKnown RBP13.44□□□□□ -0.26
MED28-203ENST00000503945 ATP6V0A4Q9HBG4 840 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 PRKAG3Q9UGI9 489 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 PLAGL2Q9UPG8 496 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 FAM50BQ9Y247 325 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 CSPG5O95196 566 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 CTDNEP1O95476 244 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 CAMK1Q14012 370 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 TARBP2Q15633 366 aaKnown RBP13.43□□□□□ -0.26
MED28-203ENST00000503945 ME3Q16798 604 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 CSPP1Q1MSJ5 1256 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 MTERF2Q49AM1 385 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 PAN2Q504Q3 1202 aaKnown RBP13.43□□□□□ -0.26
MED28-203ENST00000503945 SPOUT1Q5T280 376 aaKnown RBP13.43□□□□□ -0.26
MED28-203ENST00000503945 FAM102BQ5T8I3 360 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 B3GNT9Q6UX72 402 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 EXOC8Q8IYI6 725 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 P2RX5Q93086 422 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 ADAMTS10Q9H324 1103 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 ELAC1Q9H777 363 aaKnown RBP13.43□□□□□ -0.26
MED28-203ENST00000503945 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
MED28-203ENST00000503945 GJB4Q9NTQ9 266 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 SEPT9Q9UHD8 586 aaPredicted RBP13.43□□□□□ -0.26
MED28-203ENST00000503945 PCDHB12Q9Y5F1 795 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 MRPL42Q9Y6G3 142 aaKnown RBP13.43□□□□□ -0.26
MED28-203ENST00000503945 C5orf42Q9H799 3197 aa13.43□□□□□ -0.26
MED28-203ENST00000503945 KIAA1671Q9BY89 1806 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 TBKBP1A7MCY6 615 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 C9IYK1 514 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 TBX3O15119 743 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 LINC01565O15544 149 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 MBTPS2O43462 519 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 MGEA5O60502 916 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 P4HBP07237 508 aaKnown RBP13.42□□□□□ -0.26
MED28-203ENST00000503945 FDPSP14324 419 aaKnown RBP13.42□□□□□ -0.26
MED28-203ENST00000503945 IRS1P35568 1242 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 KRT2P35908 639 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 QARSP47897 775 aaKnown RBP13.42□□□□□ -0.26
MED28-203ENST00000503945 PPP2R5CQ13362 524 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 ADAM15Q13444 863 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 TRIM29Q14134 588 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 SMAD2Q15796 467 aaKnown RBP13.42□□□□□ -0.26
MED28-203ENST00000503945 UGCGQ16739 394 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 FAM228AQ86W67 206 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 SLFN12Q8IYM2 578 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 LINC01465Q8N7H1 131 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 SPPL3Q8TCT6 385 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 OXER1Q8TDS5 423 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 JPH2Q9BR39 696 aaPredicted RBP13.42□□□□□ -0.26
MED28-203ENST00000503945 GCOM2Q9BZD3 368 aaPredicted RBP13.42□□□□□ -0.26
MED28-203ENST00000503945 INO80BQ9C086 356 aaPredicted RBP13.42□□□□□ -0.26
MED28-203ENST00000503945 TMEM161AQ9NX61 479 aa13.42□□□□□ -0.26
MED28-203ENST00000503945 EML1O00423 815 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 HOXA2O43364 376 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 SLC37A4O43826 429 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 DTNBO60941 627 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 STBD1O95210 358 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 DARSP14868 501 aaKnown RBP13.41□□□□□ -0.26
MED28-203ENST00000503945 DNAJB1P25685 340 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 GPC3P51654 580 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 GTF3C6Q969F1 213 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 ZNF668Q96K58 619 aaPredicted RBP13.41□□□□□ -0.26
MED28-203ENST00000503945 KCNMB3Q9NPA1 279 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 TYW1Q9NV66 732 aaKnown RBP13.41□□□□□ -0.26
MED28-203ENST00000503945 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
MED28-203ENST00000503945 SUCLA2Q9P2R7 463 aaPredicted RBP13.41□□□□□ -0.26
MED28-203ENST00000503945 EVPLQ92817 2033 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 IGKV6-21A0A0C4DH24 114 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 MAFO75444 373 aaPredicted RBP13.4□□□□□ -0.26
MED28-203ENST00000503945 SEC24BO95487 1268 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 EOMESO95936 686 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 GATMP50440 423 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 DSC3Q14574 896 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 EPHA7Q15375 998 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 ANO5Q75V66 913 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 SLC7A3Q8WY07 619 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 HAS1Q92839 578 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 FBXL18Q96ME1 805 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 SH2D3AQ9BRG2 576 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 CYP26B1Q9NR63 512 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 PCDHA12Q9UN75 941 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 LIMCH1Q9UPQ0 1083 aa13.4□□□□□ -0.26
MED28-203ENST00000503945 A0A0U1RQF3 1178 aa13.39□□□□□ -0.27
MED28-203ENST00000503945 TMEM150BA6NC51 233 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms