RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 A0A1B0GTH6 734 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 TRIM49BA6NDI0 452 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 A6NJR5 290 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 ASAP2O43150 1006 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 ZEB2O60315 1214 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 KPNA6O60684 536 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 MAFO75444 373 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 PPP1R37O75864 691 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 TBC1D8O95759 1140 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 MMP3P08254 477 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 ATP1A3P13637 1013 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 NAMPTP43490 491 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 VEGFBP49765 207 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 FLT3LGP49771 235 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 DNM2P50570 870 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 PMS1P54277 932 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 NCKAP1LP55160 1127 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 GSDMDP57764 484 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 GTF2BQ00403 316 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 PPP2R3AQ06190 1150 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 MXD4Q14582 209 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 PLCB4Q15147 1175 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 LRRC41Q15345 812 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 IER5Q5VY09 327 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 TLK2Q86UE8 772 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 ZC3H3Q8IXZ2 948 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 DAW1Q8N136 415 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 AFG1LQ8WV93 481 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 COPS5Q92905 334 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 HPS3Q969F9 1004 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 IQCDQ96DY2 449 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 FIZ1Q96SL8 496 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 DUSP9Q99956 384 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 KATNAL1Q9BW62 490 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 STRA6Q9BX79 667 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 XPO4Q9C0E2 1151 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 SEMA6BQ9H3T3 888 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 METTL14Q9HCE5 456 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 KMT5AQ9NQR1 393 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 FLRT1Q9NZU1 646 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 TRPC6Q9Y210 931 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 MCM3APO60318 1980 aa8.95□□□□□ -0.98
TOPBP1-202ENST00000503338 IGKV6-21A0A0C4DH24 114 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 RRN3P2A6NIE6 340 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 CCDC169A6NNP5 214 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 SFI1A8K8P3 1242 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 H3BRB1 525 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 GPR25O00155 361 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 N4BP3O15049 544 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 SLC16A3O15427 465 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 AP5Z1O43299 807 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 NRDCO43847 1150 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 DUSP11O75319 330 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 TRPA1O75762 1119 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 PRPF6O94906 941 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 MYBP10242 640 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 TMOD1P28289 359 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 NMT1P30419 496 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 CYP2C19P33261 490 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 NPTX2P47972 431 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 CASP5P51878 434 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 MARSP56192 900 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 PEX3P56589 373 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 CDC42EP1Q00587 391 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 MAP2K1Q02750 393 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 ADAM9Q13443 819 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 KRT31Q15323 416 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 CCL14Q16627 93 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 MAEAQ7L5Y9 396 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 TRMT1LQ7Z2T5 733 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 HAUS6Q7Z4H7 955 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 SLC9A9Q8IVB4 645 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 NELFCDQ8IXH7 590 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 C12orf56Q8IXR9 622 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 SYCP3Q8IZU3 236 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 PSPC1Q8WXF1 523 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 CNOT6LQ96LI5 555 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 CEP89Q96ST8 783 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 MKNK1Q9BUB5 465 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 POLR3FQ9H1D9 316 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 TUT1Q9H6E5 874 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 XPNPEP1Q9NQW7 623 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 SRRDQ9UH36 339 aa8.94□□□□□ -0.98
TOPBP1-202ENST00000503338 A0A1W2PQC6 194 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TMEM150BA6NC51 233 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 KIAA0391O15091 583 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 DYNC1LI2O43237 492 aaPredicted RBP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 FKTNO75072 461 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 TPM1P09493 284 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 EPB41P11171 864 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 CYBAP13498 195 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 NR2F2P24468 414 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 MARK3P27448 753 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 CTGFP29279 349 aa8.93□□□□□ -0.98
TOPBP1-202ENST00000503338 ARL2P36404 184 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms