RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FERMT2Q96AC1 680 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 MTG2Q9H4K7 406 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 TOPORSQ9NS56 1045 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-203ENST00000503274 BAZ1AQ9NRL2 1556 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-203ENST00000503274 SMARCA4P51532 1647 aa7.96□□□□□ -1.13
NIPBL-203ENST00000503274 ERCC6Q03468 1493 aa7.96□□□□□ -1.13
NIPBL-203ENST00000503274 ST20-MTHFSA0A0A6YYL1 179 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 B4GALT3O60512 393 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 ZNF888P0CJ79 500 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-203ENST00000503274 CDK11BP21127 795 aaKnown RBP7.96□□□□□ -1.14
NIPBL-203ENST00000503274 ZBTB41Q5SVQ8 909 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 TRIM68Q6AZZ1 485 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 BMP8AQ7Z5Y6 402 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 BCL6BQ8N143 479 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-203ENST00000503274 OR5AN1Q8NGI8 311 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 ANO3Q9BYT9 981 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 BRINP2Q9C0B6 783 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 PITHD1Q9GZP4 211 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-203ENST00000503274 SAE1Q9UBE0 346 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-203ENST00000503274 DENND2AQ9ULE3 1009 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 DUSP10Q9Y6W6 482 aa7.96□□□□□ -1.14
NIPBL-203ENST00000503274 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 A0A0A6YYJ9 748 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 B4GALT4O60513 344 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 IBSPP21815 317 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-203ENST00000503274 STAT5BP51692 787 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 ANTXR2P58335 489 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 PDCD1Q15116 288 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 LARP4Q71RC2 724 aaKnown RBP eCLIP7.95□□□□□ -1.14
NIPBL-203ENST00000503274 RTKN2Q8IZC4 609 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 VTA1Q9NP79 307 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 MAGEL2Q9UJ55 1249 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 INVSQ9Y283 1065 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 PTPN22Q9Y2R2 807 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 MYPNQ86TC9 1320 aa7.95□□□□□ -1.14
NIPBL-203ENST00000503274 PRSS38A1L453 326 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 OPHN1O60890 802 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 HOXA5P20719 270 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 CNR2P34972 360 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 CDKN1CP49918 316 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-203ENST00000503274 MEOX1P50221 254 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 RRADP55042 308 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 MANFP55145 182 aaKnown RBP7.94□□□□□ -1.14
NIPBL-203ENST00000503274 PCOLCEQ15113 449 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 ZNF827Q17R98 1081 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 ZMAT1Q5H9K5 638 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 ZFYVE27Q5T4F4 411 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 TTLL10Q6ZVT0 673 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 PLEKHH3Q7Z736 793 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 COG1Q8WTW3 980 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 GPATCH3Q96I76 525 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 WNT8AQ9H1J5 351 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 ADAM7Q9H2U9 754 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 SLC5A4Q9NY91 659 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 SYNPO2Q9UMS6 1093 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 PPP2R3BQ9Y5P8 575 aa7.94□□□□□ -1.14
NIPBL-203ENST00000503274 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
NIPBL-203ENST00000503274 ADAMTS20P59510 1910 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 KRTAP9-7A8MTY7 169 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 PRKD3O94806 890 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 PCDH8O95206 1070 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 CLEC2LP0C7M8 214 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 NCLP19338 710 aaKnown RBP7.93□□□□□ -1.14
NIPBL-203ENST00000503274 SURF1Q15526 300 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 UBXN11Q5T124 520 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 NECAB2Q7Z6G3 386 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 FERMT3Q86UX7 667 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 PRPF38AQ8NAV1 312 aaKnown RBP7.93□□□□□ -1.14
NIPBL-203ENST00000503274 DYDC2Q96IM9 177 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 NOL10Q9BSC4 688 aaKnown RBP7.93□□□□□ -1.14
NIPBL-203ENST00000503274 HAPLN2Q9GZV7 340 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 VWA7Q9Y334 891 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 SLC4A7Q9Y6M7 1214 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 NUMBLQ9Y6R0 609 aa7.93□□□□□ -1.14
NIPBL-203ENST00000503274 PFKMP08237 780 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 MRE11P49959 708 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 PPP2CBP62714 309 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 PPP2CAP67775 309 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 ZNF568Q3ZCX4 644 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 CCDC62Q6P9F0 684 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 KLHDC10Q6PID8 442 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 ARHGEF18Q6ZSZ5 1173 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 AHCYL2Q96HN2 611 aaKnown RBP7.92□□□□□ -1.14
NIPBL-203ENST00000503274 TEPSINQ96N21 525 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 ACAP3Q96P50 834 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 KIAA1683Q9H0B3 1180 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 PUS7LQ9H0K6 701 aaKnown RBP7.92□□□□□ -1.14
NIPBL-203ENST00000503274 POLR3BQ9NW08 1133 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-203ENST00000503274 NOP58Q9Y2X3 529 aaKnown RBP7.92□□□□□ -1.14
NIPBL-203ENST00000503274 CUX2O14529 1486 aa7.92□□□□□ -1.14
NIPBL-203ENST00000503274 A0A0G2JLL6 359 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-203ENST00000503274 GOLGA8AA7E2F4 631 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 GOLGA8BA8MQT2 603 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 SESN2P58004 480 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-203ENST00000503274 CT83Q5H943 113 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 AGBL4Q5VU57 503 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 GFM2Q969S9 779 aaKnown RBP7.91□□□□□ -1.14
NIPBL-203ENST00000503274 HIST1H2AHQ96KK5 128 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 HIST1H2AJQ99878 128 aa7.91□□□□□ -1.14
NIPBL-203ENST00000503274 OR10A2Q9H208 303 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms