RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 FAM178BQ8IXR5 827 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 LACRTQ9GZZ8 138 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 NLRC4Q9NPP4 1024 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 LOXHD1Q8IVV2 1947 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 RLFQ13129 1914 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 PHIPQ8WWQ0 1821 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 LCA5LO95447 670 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 AFPP02771 609 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 EPB41P11171 864 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 H2AFXP16104 143 aaPredicted RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 LMNB1P20700 586 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 KIF11P52732 1056 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 MAPK7Q13164 816 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 BAATQ14032 418 aaPredicted RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 NOL9Q5SY16 702 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 RSRC2Q7L4I2 434 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 EHBP1Q8NDI1 1231 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 SYN2Q92777 582 aaPredicted RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 PURBQ96QR8 312 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 PAGR1Q9BTK6 254 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 HIP1RO75146 1068 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 LYPLA2O95372 231 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 QARSP47897 775 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 CASP4P49662 377 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 POLR2FP61218 127 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 COG2Q14746 738 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 ODR4Q5SWX8 454 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 SFMBT2Q5VUG0 894 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 HGSNATQ68CP4 663 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
USP46-204ENST00000503060 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 SRGAP1Q7Z6B7 1085 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 DAW1Q8N136 415 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 GANQ9H2C0 597 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 CXorf56Q9H5V9 222 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
USP46-204ENST00000503060 SSU72P8A0A1W2PR75 194 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 AKR1B10O60218 316 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 XRCC5P13010 732 aaKnown RBP12.65□□□□□ -0.38
USP46-204ENST00000503060 APBA1Q02410 837 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 SUPT20HL1Q3ZLR7 823 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 CATSPERGQ6ZRH7 1159 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 CEP112Q8N8E3 955 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 GOLGA1Q92805 767 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 TSGA10Q9BZW7 698 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 IKZF4Q9H2S9 585 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 TMOD4Q9NZQ9 345 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
USP46-204ENST00000503060 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 PCDHA13Q9Y5I0 950 aa12.65□□□□□ -0.38
USP46-204ENST00000503060 ATP9AO75110 1047 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 CCND2P30279 289 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 AMPD2Q01433 879 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 KIF5AQ12840 1032 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 PTPROQ16827 1216 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 ASTE1Q2TB18 679 aaPredicted RBP12.64□□□□□ -0.39
USP46-204ENST00000503060 TEX35Q5T0J7 233 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 KSR1Q8IVT5 923 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
USP46-204ENST00000503060 TLR2O60603 784 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 RARRES1P49788 294 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 JAK3P52333 1124 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 TMEM132BQ14DG7 1078 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 WHAMMP3Q1A5X7 153 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
USP46-204ENST00000503060 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 VSIG10LQ86VR7 867 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 SLC35C1Q96A29 364 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 STRA6Q9BX79 667 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 IFIH1Q9BYX4 1025 aaKnown RBP12.64□□□□□ -0.39
USP46-204ENST00000503060 PLCB1Q9NQ66 1216 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 PLSCR2Q9NRY7 297 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 AFG3L2Q9Y4W6 797 aa12.64□□□□□ -0.39
USP46-204ENST00000503060 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
USP46-204ENST00000503060 ATP2A1O14983 1001 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
USP46-204ENST00000503060 PPP1R37O75864 691 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 CCNE2O96020 404 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 SERPING1P05155 500 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 NR3C2P08235 984 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 PSMC2P35998 433 aaKnown RBP12.63□□□□□ -0.39
USP46-204ENST00000503060 CHMP4BP1P59074 171 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 KRT76Q01546 638 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 BIRC2Q13490 618 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 TDRD12Q587J7 1177 aaKnown RBP12.63□□□□□ -0.39
USP46-204ENST00000503060 TCERG1LQ5VWI1 586 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP46-204ENST00000503060 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 MKNK1Q9BUB5 465 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 GBP3Q9H0R5 595 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms