RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
NUP54-202ENST00000502850 UBIAD1Q9Y5Z9 338 aa13.07□□□□□ -0.32
NUP54-202ENST00000502850 ZNF536O15090 1300 aa13.07□□□□□ -0.32
NUP54-202ENST00000502850 PHF20L1A8MW92 1017 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PDE2AO00408 941 aaPredicted RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 CLIC2O15247 247 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 MAPK13O15264 365 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 P4HA2O15460 535 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 BUB1O43683 1085 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 ZBED4O75132 1171 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PALMO75781 387 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 CYP2C19P33261 490 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 TNNT3P45378 269 aaPredicted RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 QARSP47897 775 aaKnown RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 FMO5P49326 533 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 UBXN2AP68543 259 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PTK2Q05397 1052 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 RASA3Q14644 834 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 MEI1Q5TIA1 1274 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 DCAF15Q66K64 600 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 C8orf74Q6P047 294 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 INTS8Q75QN2 995 aaKnown RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 C12orf56Q8IXR9 622 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 COG1Q8WTW3 980 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 STK33Q9BYT3 514 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 AGO4Q9HCK5 861 aaKnown RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 SIX2Q9NPC8 291 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 KCNH7Q9NS40 1196 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 FBXO28Q9NVF7 368 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 NAGPAQ9UK23 515 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 K7ENM7 598 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 DKC1O60832 514 aaKnown RBP eCLIP13.06□□□□□ -0.32
NUP54-202ENST00000502850 HIP1RO75146 1068 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PPP1R37O75864 691 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 ACTN1P12814 892 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 ITGB5P18084 799 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 KLRC1P26715 233 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 INPP5BP32019 993 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 CASP4P49662 377 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 NPEPPSP55786 919 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 MYL7Q01449 175 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 KRT76Q01546 638 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 MTMR1Q13613 665 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 TKFCQ3LXA3 575 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 EMBQ6PCB8 327 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 CCNI2Q6ZMN8 369 aaPredicted RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 ZNF571Q7Z3V5 609 aaPredicted RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 ANKRD13CQ8N6S4 541 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 HVCN1Q96D96 273 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PBKQ96KB5 322 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 AGBL1Q96MI9 1066 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 ACCSQ96QU6 501 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 FIZ1Q96SL8 496 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 SELENOOQ9BVL4 669 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 STRA6Q9BX79 667 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
NUP54-202ENST00000502850 STIM2Q9P246 746 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 PPP1R9AQ9ULJ8 1098 aa13.06□□□□□ -0.32
NUP54-202ENST00000502850 EXOC3O60645 756 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 H2AFZP0C0S5 128 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 EPHX2P34913 555 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 SOX5P35711 763 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 EPHB4P54760 987 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 TNNC1P63316 161 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 BFSP1Q12934 665 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 NNTQ13423 1086 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 NBPF9Q3BBW0 867 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
NUP54-202ENST00000502850 H2AFVQ71UI9 128 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 BANK1Q8NDB2 785 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 GLIS2Q9BZE0 524 aaPredicted RBP13.05□□□□□ -0.32
NUP54-202ENST00000502850 SALL4Q9UJQ4 1053 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 NENFQ9UMX5 172 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 SAMM50Q9Y512 469 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 GJA3Q9Y6H8 435 aa13.05□□□□□ -0.32
NUP54-202ENST00000502850 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 F8VZ95 297 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 NFIBO00712 420 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 ALAS1P13196 640 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 PLS3P13797 630 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 ABCD1P33897 745 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 OAZ1P54368 228 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 RPS6KA1Q15418 735 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 ZC2HC1CQ53FD0 456 aaPredicted RBP13.04□□□□□ -0.32
NUP54-202ENST00000502850 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
NUP54-202ENST00000502850 IFT20Q8IY31 132 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 C4orf19Q8IY42 314 aa13.04□□□□□ -0.32
NUP54-202ENST00000502850 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms