RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NIPA1Q7RTP0 329 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 MIER3Q7Z3K6 550 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 SYCE1Q8N0S2 351 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
VCAN-204ENST00000502527 AGBL1Q96MI9 1066 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 STRA6Q9BX79 667 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 GLIS2Q9BZE0 524 aaPredicted RBP18.05■□□□□ 0.48
VCAN-204ENST00000502527 EPB41L5Q9HCM4 733 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 ZNF277Q9NRM2 450 aaPredicted RBP18.05■□□□□ 0.48
VCAN-204ENST00000502527 TMEM59LQ9UK28 342 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 DNAJC12Q9UKB3 198 aa18.05■□□□□ 0.48
VCAN-204ENST00000502527 GOLGA8KD6RF30 607 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 EVI5O60447 810 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 EXOC3O60645 756 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 HSF2BPO75031 334 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 P4HBP07237 508 aaKnown RBP18.04■□□□□ 0.48
VCAN-204ENST00000502527 PADI6Q6TGC4 694 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 MCF2L2Q86YR7 1114 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 AGBL3Q8NEM8 1001 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 ACTRT1Q8TDG2 376 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 INTS2Q9H0H0 1204 aaKnown RBP18.04■□□□□ 0.48
VCAN-204ENST00000502527 KCNH7Q9NS40 1196 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 RPTORQ8N122 1335 aa18.04■□□□□ 0.48
VCAN-204ENST00000502527 GOLGA6CA6NDK9 693 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 PPP1R37O75864 691 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 GOLGA6DP0CG33 693 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 MAP3K10Q02779 954 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 MAPK7Q13164 816 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 ALCAMQ13740 583 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 DRAP1Q14919 205 aaPredicted RBP18.03■□□□□ 0.48
VCAN-204ENST00000502527 SLFN11Q7Z7L1 901 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 SLC30A5Q8TAD4 765 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 FAM76AQ8TAV0 307 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 RUFY1Q96T51 708 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 SH3GL2Q99962 352 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 VPS33BQ9H267 617 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 GOLGA6AQ9NYA3 693 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 DDX39AO00148 427 aaKnown RBP18.03■□□□□ 0.48
VCAN-204ENST00000502527 INPP5BP32019 993 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 CARSP49589 748 aaKnown RBP18.03■□□□□ 0.48
VCAN-204ENST00000502527 RNASE9P60153 205 aaKnown RBP18.03■□□□□ 0.48
VCAN-204ENST00000502527 MYL7Q01449 175 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 CBWD6Q4V339 395 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 CBWD3Q5JTY5 395 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 CBWD5Q5RIA9 395 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 PEX26Q7Z412 305 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 DAW1Q8N136 415 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 PRPF38AQ8NAV1 312 aaKnown RBP18.03■□□□□ 0.48
VCAN-204ENST00000502527 IFT81Q8WYA0 676 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 TMEM206Q9H813 350 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 LARSQ9P2J5 1176 aaKnown RBP18.03■□□□□ 0.48
VCAN-204ENST00000502527 APEX2Q9UBZ4 518 aa18.03■□□□□ 0.48
VCAN-204ENST00000502527 CEP104O60308 925 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 TRIM49P0CI25 452 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 TRIM49CP0CI26 452 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 MAPTP10636 758 aaKnown RBP18.02■□□□□ 0.48
VCAN-204ENST00000502527 RFX1P22670 979 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 BFSP1Q12934 665 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 PPFIA1Q13136 1202 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 TSEN2Q8NCE0 465 aaKnown RBP18.02■□□□□ 0.48
VCAN-204ENST00000502527 LNX1Q8TBB1 728 aaPredicted RBP18.02■□□□□ 0.48
VCAN-204ENST00000502527 CALR3Q96L12 384 aaKnown RBP18.02■□□□□ 0.48
VCAN-204ENST00000502527 ZNF341Q9BYN7 854 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 SUCLA2Q9P2R7 463 aaPredicted RBP18.02■□□□□ 0.48
VCAN-204ENST00000502527 PGAP2Q9UHJ9 254 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 DBR1Q9UK59 544 aaKnown RBP18.02■□□□□ 0.48
VCAN-204ENST00000502527 ZNRF3Q9ULT6 936 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 NFU1Q9UMS0 254 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 ZNF536O15090 1300 aa18.02■□□□□ 0.48
VCAN-204ENST00000502527 RBBP6Q7Z6E9 1792 aaKnown RBP18.02■□□□□ 0.47
VCAN-204ENST00000502527 K7ENM7 598 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 KRT13P13646 458 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 GALCP54803 685 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 DNAAF5Q86Y56 855 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 NIM1KQ8IY84 436 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 SCFD2Q8WU76 684 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 CLEC4DQ8WXI8 215 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.02■□□□□ 0.47
VCAN-204ENST00000502527 HOOK2Q96ED9 719 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 COL20A1Q9P218 1284 aa18.02■□□□□ 0.47
VCAN-204ENST00000502527 RGPD3A6NKT7 1758 aaPredicted RBP18.01■□□□□ 0.47
VCAN-204ENST00000502527 RGPD4Q7Z3J3 1758 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 TMCO5BA8MYB1 307 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 PGRMC1O00264 195 aaKnown RBP18.01■□□□□ 0.47
VCAN-204ENST00000502527 NFIBO00712 420 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 WDR46O15213 610 aaKnown RBP18.01■□□□□ 0.47
VCAN-204ENST00000502527 DHX15O43143 795 aaKnown RBP18.01■□□□□ 0.47
VCAN-204ENST00000502527 GHRHRQ02643 423 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 TKFCQ3LXA3 575 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 DAAM2Q86T65 1068 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 GLYCTKQ8IVS8 523 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 KLHL7Q8IXQ5 586 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 TMEM174Q8WUU8 243 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 LPAR1Q92633 364 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.01■□□□□ 0.47
VCAN-204ENST00000502527 GOLPH3Q9H4A6 298 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 PKD2L1Q9P0L9 805 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 STXBP5LQ9Y2K9 1186 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 UBIAD1Q9Y5Z9 338 aa18.01■□□□□ 0.47
VCAN-204ENST00000502527 RAD51CO43502 376 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms