RNA–Protein interactions for RNA: ENST00000501704.3

TSC22D1-211, Transcript of TSC22 domain family member 1, humanhuman

TSL 2 BASIC

Gene TSC22D1, Length 4,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-211ENST00000501704 HOXA7P31268 230 aaPredicted RBP16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 PABPC4Q13310 644 aaKnown RBP eCLIP16.17■□□□□ 0.183e-6■■■■□ 25.4
TSC22D1-211ENST00000501704 PDIA5Q14554 519 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 ZNF268Q14587 947 aaPredicted RBP16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 CCDC137Q6PK04 289 aaKnown RBP16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 PITPNM3Q9BZ71 974 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 METTL14Q9HCE5 456 aaKnown RBP16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 LRRC4CQ9HCJ2 640 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 AFF2P51816 1311 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 POTEB3A0JP26 581 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 POTECB2RU33 542 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 AP1G2O75843 785 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 MAPK7Q13164 816 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 POTEBQ6S5H4 581 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 RNF25Q96BH1 459 aaPredicted RBP16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 PPP1R9AQ9ULJ8 1098 aa16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 THRAP3Q9Y2W1 955 aaKnown RBP16.17■□□□□ 0.18
TSC22D1-211ENST00000501704 THAP12O43422 761 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 IRF2BP2Q7Z5L9 587 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 LRRC57Q8N9N7 239 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 GANQ9H2C0 597 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 LAMB4A4D0S4 1761 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 LRRN2O75325 713 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 FGRP09769 529 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 PON1P27169 355 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 POLE2P56282 527 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 RWDD2BP57060 319 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 C12orf60Q5U649 245 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 ERMNQ8TAM6 284 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 MEIS1O00470 390 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 CHRNA3P32297 505 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 SBK1Q52WX2 424 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 RNF217Q8TC41 542 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 NUDCD1Q96RS6 583 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 NUDT17P0C025 328 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 SNX1Q13596 522 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 ARHGEF18Q6ZSZ5 1173 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 ATXN2LQ8WWM7 1075 aaKnown RBP16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 MRRFQ96E11 262 aaKnown RBP16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 ZNF570Q96NI8 536 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 CARD9Q9H257 536 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 DNM3Q9UQ16 869 aa16.16■□□□□ 0.18
TSC22D1-211ENST00000501704 EME2A4GXA9 379 aaPredicted RBP16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 SNUPNO95149 360 aaKnown RBP16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 LDHCP07864 332 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 RARAP10276 462 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 CNGA2Q16280 664 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 SRRM1Q8IYB3 904 aaKnown RBP16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 ANKIB1Q9P2G1 1089 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 CORO1CQ9ULV4 474 aaPredicted RBP16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 PALM3A6NDB9 673 aaPredicted RBP16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 BTNL10A8MVZ5 291 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 MIS18BP1Q6P0N0 1132 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 SCFD1Q8WVM8 642 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 TRIM4Q9C037 500 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 BAZ2AQ9UIF9 1905 aaKnown RBP16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 HSPA6P17066 643 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 SSR1P43307 286 aaKnown RBP16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 KCNJ1P48048 391 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 RDH13Q8NBN7 331 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 DNAJC12Q9UKB3 198 aa16.15■□□□□ 0.18
TSC22D1-211ENST00000501704 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 SYNGAP1Q96PV0 1343 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 M0R2N6 131 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 DDX3XO00571 662 aaKnown RBP eCLIP16.14■□□□□ 0.175e-7■■■■■ 27.1
TSC22D1-211ENST00000501704 PHF2O75151 1096 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 RASSF2P50749 326 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 ORC2Q13416 577 aaPredicted RBP16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 DUPD1Q68J44 220 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 SH3RF3Q8TEJ3 882 aaPredicted RBP16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 PLVAPQ9BX97 442 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 FGFBP2Q9BYJ0 223 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 DRAP1Q14919 205 aaPredicted RBP16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 DIXDC1Q155Q3 683 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 TRIP13Q15645 432 aaPredicted RBP16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 USP54Q70EL1 1684 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 USP17L5A8MUK1 530 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 ECEL1O95672 775 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 ZNF76P36508 570 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 IL9RQ01113 521 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 GRIK3Q13003 919 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 KNOP1Q1ED39 458 aaKnown RBP16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 SFR1Q86XK3 245 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 RASGEF1CQ8N431 466 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 L3MBTL3Q96JM7 780 aaPredicted RBP16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.14■□□□□ 0.174e-8■■■■■ 89.7
TSC22D1-211ENST00000501704 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
TSC22D1-211ENST00000501704 FAM13AO94988 1023 aa16.13■□□□□ 0.17
TSC22D1-211ENST00000501704 RPL21P46778 160 aaKnown RBP16.13■□□□□ 0.17
TSC22D1-211ENST00000501704 STRN3Q13033 797 aa16.13■□□□□ 0.17
TSC22D1-211ENST00000501704 IKQ13123 557 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms