RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DDX39AO00148 427 aaKnown RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 IPO5O00410 1097 aaKnown RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 CEP104O60308 925 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 MUTP22033 750 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SETQ01105 290 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 DRAP1Q14919 205 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 HS2ST1Q7LGA3 356 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SLFN11Q7Z7L1 901 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SRLQ86TD4 932 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 GLYCTKQ8IVS8 523 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 METTL13Q8N6R0 699 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SUPT20HQ8NEM7 779 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 ACTRT1Q8TDG2 376 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SCFD2Q8WU76 684 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 PBKQ96KB5 322 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 TEKT3Q9BXF9 490 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 TMEM39BQ9GZU3 492 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 EHMT1Q9H9B1 1298 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 VEZTQ9HBM0 779 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 DNAJC12Q9UKB3 198 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 STXBP5LQ9Y2K9 1186 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 A0A0A6YYK5 440 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-204ENST00000501271 FAM170AA1A519 330 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 OPA1O60313 960 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 HIP1RO75146 1068 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 PPP1R37O75864 691 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 KRT14P02533 472 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 ITGB5P18084 799 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 GALCP54803 685 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 ERVK-9P63128 1117 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 PPFIA1Q13136 1202 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 DLGAP5Q15398 846 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 KCTD19Q17RG1 926 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-204ENST00000501271 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 PIK3R5Q8WYR1 880 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 RUFY1Q96T51 708 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 GMLQ99445 158 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 SYT11Q9BT88 431 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 STRA6Q9BX79 667 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 AP1M1Q9BXS5 423 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 STK33Q9BYT3 514 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 INTS2Q9H0H0 1204 aaKnown RBP10.73□□□□□ -0.69
CLIP1-204ENST00000501271 OSGEPQ9NPF4 335 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 KCND2Q9NZV8 630 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 FRMD4BQ9Y2L6 1034 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 NOC2LQ9Y3T9 749 aaKnown RBP10.73□□□□□ -0.69
CLIP1-204ENST00000501271 IGSF9BQ9UPX0 1349 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 ARHGEF35A5YM69 484 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 TMCO5BA8MYB1 307 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 GUCY2CP25092 1073 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 ECHS1P30084 290 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 PLS1Q14651 629 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 FER1L6Q2WGJ9 1857 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 GRIPAP1Q4V328 841 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 PEX26Q7Z412 305 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 DAAM2Q86T65 1068 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 NT5DC3Q86UY8 548 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 IQCKQ8N0W5 287 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 MREGQ8N565 214 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 IL31RAQ8NI17 732 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 AGBL1Q96MI9 1066 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 MXRA8Q9BRK3 442 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 INTUQ9ULD6 942 aa10.73□□□□□ -0.69
CLIP1-204ENST00000501271 RRP15Q9Y3B9 282 aaKnown RBP10.73□□□□□ -0.69
CLIP1-204ENST00000501271 NCANO14594 1321 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 GRIN2DO15399 1336 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 ZNF233A6NK53 670 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 TISP43B9A030 160 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 PGRMC1O00264 195 aaKnown RBP10.72□□□□□ -0.69
CLIP1-204ENST00000501271 PLA2G6O60733 806 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 MYL7Q01449 175 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 BFSP1Q12934 665 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 PPP2R5AQ15172 486 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 STXBP4Q6ZWJ1 553 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 MAEAQ7L5Y9 396 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 FAM160B2Q86V87 743 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 SH2D3CQ8N5H7 860 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 RDH13Q8NBN7 331 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-204ENST00000501271 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLIP1-204ENST00000501271 SUCLA2Q9P2R7 463 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-204ENST00000501271 APEX2Q9UBZ4 518 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 BCS1LQ9Y276 419 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 ZNF536O15090 1300 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 K7ENM7 598 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 MYO1CO00159 1063 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 NFIBO00712 420 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 EXOC3O60645 756 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 ITGA4P13612 1032 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 CAP2P40123 477 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 IRAK1P51617 712 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 HSD17B4P51659 736 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 DLG4P78352 724 aa10.72□□□□□ -0.69
CLIP1-204ENST00000501271 DNAJC21Q5F1R6 531 aaKnown RBP10.72□□□□□ -0.69
CLIP1-204ENST00000501271 CFAP58Q5T655 872 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms