RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 VIL1P09327 827 aaKnown RBP17.84■□□□□ 0.45
COL6A1-206ENST00000498614 HOXD13P35453 343 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 ZNF76P36508 570 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 RBM26Q5T8P6 1007 aaKnown RBP17.84■□□□□ 0.45
COL6A1-206ENST00000498614 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 BHMT2Q9H2M3 363 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 CD248Q9HCU0 757 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 GGA2Q9UJY4 613 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 SERPINA10Q9UK55 444 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 SRRM3A6NNA2 597 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-206ENST00000498614 FOSP01100 380 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-206ENST00000498614 FKBP1AP62942 108 aaKnown RBP17.84■□□□□ 0.45
COL6A1-206ENST00000498614 SETQ01105 290 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-206ENST00000498614 PTK2Q05397 1052 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 SLC12A6Q9UHW9 1150 aa17.84■□□□□ 0.45
COL6A1-206ENST00000498614 CES2O00748 559 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 TMOD1P28289 359 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 FLT3P36888 993 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 CUL1Q13616 776 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 KNOP1Q1ED39 458 aaKnown RBP17.83■□□□□ 0.45
COL6A1-206ENST00000498614 ZNF571Q7Z3V5 609 aaPredicted RBP17.83■□□□□ 0.45
COL6A1-206ENST00000498614 ARFGAP2Q8N6H7 521 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.83■□□□□ 0.45
COL6A1-206ENST00000498614 PRMT6Q96LA8 375 aaPredicted RBP17.83■□□□□ 0.45
COL6A1-206ENST00000498614 FAM20AQ96MK3 541 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 CSRNP1Q96S65 589 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.45
COL6A1-206ENST00000498614 RUSC1Q9BVN2 902 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 RGL1Q9NZL6 768 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 VAV3Q9UKW4 847 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 ATAD5Q96QE3 1844 aa17.83■□□□□ 0.45
COL6A1-206ENST00000498614 EML1O00423 815 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 SLC9A1P19634 815 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 CTNNA1P35221 906 aaKnown RBP17.83■□□□□ 0.44
COL6A1-206ENST00000498614 MAP2K2P36507 400 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 ECE1P42892 770 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 MMP14P50281 582 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 QPCTQ16769 361 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 EIF1ADQ8N9N8 165 aaKnown RBP17.83■□□□□ 0.44
COL6A1-206ENST00000498614 DDX47Q9H0S4 455 aaKnown RBP17.83■□□□□ 0.44
COL6A1-206ENST00000498614 BCCIPQ9P287 314 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL6A1-206ENST00000498614 DDX20Q9UHI6 824 aaKnown RBP17.83■□□□□ 0.44
COL6A1-206ENST00000498614 PRR12Q9ULL5 1215 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 TRAF3IP3Q9Y228 551 aa17.83■□□□□ 0.44
COL6A1-206ENST00000498614 GMNCA6NCL1 334 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 BTNL10A8MVZ5 291 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 SART1O43290 800 aaKnown RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 SMTNP53814 917 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 DCAF17Q5H9S7 520 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 CIAPIN1Q6FI81 312 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 EPM2AIP1Q7L775 607 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 IRF2BP2Q7Z5L9 587 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 LRRC57Q8N9N7 239 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 PBKQ96KB5 322 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 EIF2AK1Q9BQI3 630 aaKnown RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 VPS33BQ9H267 617 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 CNOT8Q9UFF9 292 aaKnown RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 ARMCX3Q9UH62 379 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 FBXL5Q9UKA1 691 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 SCAF8Q9UPN6 1271 aaKnown RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 SFI1A8K8P3 1242 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 BHMG1C9JSJ3 638 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 BACH1O14867 736 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 ZBTB48P10074 688 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-206ENST00000498614 SPRED3Q2MJR0 410 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 ACTRT1Q8TDG2 376 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 LRRC45Q96CN5 670 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 KLC4Q9NSK0 619 aa17.82■□□□□ 0.44
COL6A1-206ENST00000498614 TRAPPC3O43617 180 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 RASSF9O75901 435 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 GCNT3O95395 438 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 CIITAP33076 1130 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 KCNA1Q09470 495 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 CTTNQ14247 550 aaKnown RBP17.81■□□□□ 0.44
COL6A1-206ENST00000498614 TCERG1LQ5VWI1 586 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 METTL13Q8N6R0 699 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 PIGOQ8TEQ8 1089 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 UBLCP1Q8WVY7 318 aaPredicted RBP17.81■□□□□ 0.44
COL6A1-206ENST00000498614 GMLQ99445 158 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 SLC40A1Q9NP59 571 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 RABGAP1Q9Y3P9 1069 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 NOC2LQ9Y3T9 749 aaKnown RBP17.81■□□□□ 0.44
COL6A1-206ENST00000498614 CLIC2O15247 247 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 CHMP2AO43633 222 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 CALUO43852 315 aaPredicted RBP17.81■□□□□ 0.44
COL6A1-206ENST00000498614 AKAP3O75969 853 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 CFBP00751 764 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 AFPP02771 609 aaKnown RBP17.81■□□□□ 0.44
COL6A1-206ENST00000498614 ITGA4P13612 1032 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 CASP4P49662 377 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 PLCB4Q15147 1175 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 KIAA1755Q5JYT7 1200 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 DPY19L2P1Q6NXN4 242 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 BTNL9Q6UXG8 535 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 FRMD5Q7Z6J6 570 aa17.81■□□□□ 0.44
COL6A1-206ENST00000498614 ZKSCAN4Q969J2 545 aaPredicted RBP17.81■□□□□ 0.44
COL6A1-206ENST00000498614 A1CFQ9NQ94 594 aaKnown RBP17.81■□□□□ 0.44
COL6A1-206ENST00000498614 ASTN1O14525 1302 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms