RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 SUCLA2Q9P2R7 463 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-214ENST00000497677 MYH9P35579 1960 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 PTPRSQ13332 1948 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 A0A087WWV3 80 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 DNM2P50570 870 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 CDC42EP1Q00587 391 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 PTGDRQ13258 359 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 MCTP1Q6DN14 999 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 CATSPER3Q86XQ3 398 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 MAFAQ8NHW3 353 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 ARNTL2Q8WYA1 636 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 ZNF689Q96CS4 500 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 TGS1Q96RS0 853 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 YME1L1Q96TA2 773 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 GAS2L1Q99501 681 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 ADAM2Q99965 735 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 RGS18Q9NS28 235 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 ANKEF1Q9NU02 776 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 SIP14410 1827 aa17.83■□□□□ 0.44
CTDSP1-214ENST00000497677 C9IYK1 514 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 H3BQV1 296 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 LPXNO60711 386 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 MED24O75448 989 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 DGKIO75912 1065 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 ZSCAN22P10073 491 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 XRCC6P12956 609 aaKnown RBP eCLIP17.82■□□□□ 0.448e-6■□□□□ 10.2
CTDSP1-214ENST00000497677 POU3F3P20264 500 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 MCM4P33991 863 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 RFC5P40937 340 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 FXR2P51116 673 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 FAM189BP81408 668 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 IL17AQ16552 155 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 ODR4Q5SWX8 454 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 KSR1Q8IVT5 923 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 SLC7A3Q8WY07 619 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 POLR3CQ9BUI4 534 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 TUFT1Q9NNX1 390 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 XPNPEP1Q9NQW7 623 aa17.82■□□□□ 0.44
CTDSP1-214ENST00000497677 MICAL3Q7RTP6 2002 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 A0A087WZ62 844 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 CSDE1O75534 798 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 RARRES1P49788 294 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 RILPL1Q5EBL4 403 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 ZNF410Q86VK4 478 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 NPAS4Q8IUM7 802 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 EXOC8Q8IYI6 725 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 PIGOQ8TEQ8 1089 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 PRPF31Q8WWY3 499 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 NLRP7Q8WX94 980 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 TMEM143Q96AN5 459 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 FDXACB1Q9BRP7 624 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 C17orf80Q9BSJ5 609 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 IFT122Q9HBG6 1241 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 EYSQ5T1H1 3165 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 MYO9BQ13459 2157 aa17.81■□□□□ 0.44
CTDSP1-214ENST00000497677 FGFR4P22455 802 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 RPA1P27694 616 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 SARSP49591 514 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 PDIA5Q14554 519 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 EMC2Q15006 297 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 SLC24A5Q71RS6 500 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 IGSF22Q8N9C0 903 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 GCOM2Q9BZD3 368 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 BMP2KQ9NSY1 1161 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 EVPLQ92817 2033 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 GBF1Q92538 1859 aa17.8■□□□□ 0.44
CTDSP1-214ENST00000497677 TTC3P53804 2025 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 WDR81Q562E7 1941 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 GAS2O43903 313 aaKnown RBP17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 IGFBP4P22692 258 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 PRPHP41219 470 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 GRB10Q13322 594 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 PKP1Q13835 747 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 ECM1Q16610 540 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 C1orf112Q9NSG2 853 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 MTUS1Q9ULD2 1270 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 MTMR6Q9Y217 621 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 COL4A3BPQ9Y5P4 624 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 MTCH2Q9Y6C9 303 aa17.79■□□□□ 0.44
CTDSP1-214ENST00000497677 DENND3A2RUS2 1198 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 LAD1O00515 517 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 STAG3L1P0CL83 205 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 LAMTOR4Q0VGL1 99 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 EPC2Q52LR7 807 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 FERMT3Q86UX7 667 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 NLRP4Q96MN2 994 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 SCLT1Q96NL6 688 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 NACC1Q96RE7 527 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 ZSCAN16Q9H4T2 348 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms