RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	SCFD2	Q8WU76	684 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SLITRK6	Q9H5Y7	841 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RPS6KL1	Q9Y6S9	549 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ATP9A	O75110	1047 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ADAMTS2	O95450	1211 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	FES	P07332	822 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CPA2	P48052	419 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PEX5	P50542	639 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	HS2ST1	Q7LGA3	356 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PDCD7	Q8N8D1	485 aa	Known RBP	11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MAIP1	Q8WWC4	291 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	C9orf72	Q96LT7	481 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MYLK2	Q9H1R3	596 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RNPEPL1	Q9HAU8	725 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PPP1R9A	Q9ULJ8	1098 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PCDHA6	Q9UN73	950 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PCDHA8	Q9Y5H6	950 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	AGT	P01019	485 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SKI	P12755	728 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CALB2	P22676	271 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CACNA2D1	P54289	1103 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CENPP	Q6IPU0	288 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	LRP10	Q7Z4F1	713 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PIGW	Q7Z7B1	504 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SLC44A5	Q8NCS7	719 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PHC3	Q8NDX5	983 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	C1orf54	Q8WWF1	131 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ITFG2	Q969R8	447 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TTC1	Q99614	292 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NUDT12	Q9BQG2	462 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GORASP1	Q9BQQ3	440 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TMX4	Q9H1E5	349 aa	Predicted RBP	11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SLCO1B3	Q9NPD5	702 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SLAIN2	Q9P270	581 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	LNPEP	Q9UIQ6	1025 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	HDAC9	Q9UKV0	1011 aa		11.44	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CFAP69	A5D8W1	941 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SP100	P23497	879 aa	Predicted RBP	11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PPP2R5B	Q15173	497 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SEL1L2	Q5TEA6	688 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	OLFML2B	Q68BL8	750 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NSMF	Q6X4W1	530 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	UNC13D	Q70J99	1090 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	NEK8	Q86SG6	692 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	EXOC3L1	Q86VI1	746 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SYCE1	Q8N0S2	351 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	IQCD	Q96DY2	449 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CCSER1	Q9C0I3	900 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	STRCP1	A6NGW2	1772 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597		A0A0G2JND7	137 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597		E9PMD0	336 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MEIS1	O00470	390 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RNF8	O76064	485 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TDP2	O95551	362 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	USP17L8	P0C7I0	530 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MMP13	P45452	471 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RPL21	P46778	160 aa	Known RBP	11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	FUT2	Q10981	343 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	OVGP1	Q12889	678 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	MDH1B	Q5I0G3	518 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CCDC137	Q6PK04	289 aa	Known RBP	11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GPBP1	Q86WP2	473 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	C4orf33	Q8N1A6	199 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TNFRSF25	Q93038	417 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	FGFBP2	Q9BYJ0	223 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RAB34	Q9BZG1	259 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SLC4A7	Q9Y6M7	1214 aa		11.43	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	FAM196B	A6NMK8	535 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SRRM3	A6NNA2	597 aa	Predicted RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CAPN9	O14815	690 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	XRCC5	P13010	732 aa	Known RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	STAT1	P42224	750 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TMED1	Q13445	227 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	DBN1	Q16643	649 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	HIPK4	Q8NE63	616 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	SLC35G2	Q8TBE7	412 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	STK32A	Q8WU08	396 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CNKSR1	Q969H4	720 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	TLCD1	Q96CP7	247 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	KIAA1683	Q9H0B3	1180 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	C6orf50	Q9HD87	102 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CHCHD3	Q9NX63	227 aa	Known RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	KIAA1024	Q9UPX6	916 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RASA4B	C9J798	803 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	RASA4	O43374	803 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PAEP	P09466	180 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	HNRNPH3	P31942	346 aa	Known RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	PPP1R2	P41236	205 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	BNIP1	Q12981	228 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	COASY	Q13057	564 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	AUH	Q13825	339 aa	Known RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	USP17L2	Q6R6M4	530 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	KCNK18	Q7Z418	384 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	GUF1	Q8N442	669 aa	Known RBP	11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	FAM13C	Q8NE31	585 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	CFAP61	Q8NHU2	1237 aa		11.42	□□□□□ -0.58
TRAPPC12-223	ENST00000497597	ACTRT1	Q8TDG2	376 aa		11.42	□□□□□ -0.58

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