RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ITIH3Q06033 890 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 SPOUT1Q5T280 376 aaKnown RBP11.19□□□□□ -0.62
SRSF4-205ENST00000497015 APOA5Q6Q788 366 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 RUFY3Q7L099 469 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 MRPL43Q8N983 215 aaKnown RBP11.19□□□□□ -0.62
SRSF4-205ENST00000497015 SUMF1Q8NBK3 374 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 TRAPPC12Q8WVT3 735 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 TMEM40Q8WWA1 233 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
SRSF4-205ENST00000497015 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 SENP7Q9BQF6 1050 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
SRSF4-205ENST00000497015 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 TRPV2Q9Y5S1 764 aa11.19□□□□□ -0.62
SRSF4-205ENST00000497015 PNMA6FA0A0J9YX94 578 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 CCDC196A0A1B0GTZ2 297 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 C2orf71A6NGG8 1288 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 ZBTB43O43298 467 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 FIBPO43427 364 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 CYTH3O43739 400 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 NARSO43776 548 aaKnown RBP11.18□□□□□ -0.62
SRSF4-205ENST00000497015 KCNA2P16389 499 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 FGD1P98174 961 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 PTGDRQ13258 359 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
SRSF4-205ENST00000497015 IER5Q5VY09 327 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 SIX5Q8N196 739 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 CASP10Q92851 521 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 NECTIN4Q96NY8 510 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 CASD1Q96PB1 797 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 PIGSQ96S52 555 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 ADAM2Q99965 735 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 SEMA4AQ9H3S1 761 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 RGS18Q9NS28 235 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 NOC2LQ9Y3T9 749 aaKnown RBP11.18□□□□□ -0.62
SRSF4-205ENST00000497015 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
SRSF4-205ENST00000497015 FNDC1Q4ZHG4 1894 aaPredicted RBP11.18□□□□□ -0.62
SRSF4-205ENST00000497015 FSD2A1L4K1 749 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 EOMESO95936 686 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 ATXN1P54253 815 aaKnown RBP11.17□□□□□ -0.62
SRSF4-205ENST00000497015 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
SRSF4-205ENST00000497015 PAK2Q13177 524 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 GNPTABQ3T906 1256 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 CES5AQ6NT32 575 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 KCNT2Q6UVM3 1135 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 TMTC3Q6ZXV5 915 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 MAML2Q8IZL2 1156 aaPredicted RBP11.17□□□□□ -0.62
SRSF4-205ENST00000497015 SEPT1Q8WYJ6 367 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 RTP3Q9BQQ7 232 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 NGRNQ9NPE2 291 aaKnown RBP11.17□□□□□ -0.62
SRSF4-205ENST00000497015 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 CYP26B1Q9NR63 512 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 DLGAP2Q9P1A6 1054 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 PCDHA2Q9Y5H9 948 aa11.17□□□□□ -0.62
SRSF4-205ENST00000497015 KDM3AQ9Y4C1 1321 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 N4BP1O75113 896 aaKnown RBP11.16□□□□□ -0.62
SRSF4-205ENST00000497015 STAM2O75886 525 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 SP9P0CG40 484 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 EPCAMP16422 314 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 MTHFRP42898 656 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 TDGQ13569 410 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 COL9A3Q14050 684 aaPredicted RBP11.16□□□□□ -0.62
SRSF4-205ENST00000497015 KIAA1841Q6NSI8 718 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 Q6ZUG5 572 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 SLC24A5Q71RS6 500 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 MICU3Q86XE3 530 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
SRSF4-205ENST00000497015 TDRD5Q8NAT2 981 aaKnown RBP11.16□□□□□ -0.62
SRSF4-205ENST00000497015 SLC22A17Q8WUG5 538 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 RSAD2Q8WXG1 361 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
SRSF4-205ENST00000497015 TMUB1Q9BVT8 246 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 LRRC2Q9BYS8 371 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 KCNK12Q9HB15 430 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 ERAP1Q9NZ08 941 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
SRSF4-205ENST00000497015 DUSP12Q9UNI6 340 aa11.16□□□□□ -0.62
SRSF4-205ENST00000497015 KLF18A0A0U1RQI7 1052 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 POTEMA6NI47 508 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 MEIS2O14770 477 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 SRGAP2BP0DMP2 458 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 ITGB5P18084 799 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 LAG3P18627 525 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 KRT76Q01546 638 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 DSC3Q14574 896 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 PLCB4Q15147 1175 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 ANKRD1Q15327 319 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 RTN1Q16799 776 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 C8orf34Q49A92 452 aa11.15□□□□□ -0.62
SRSF4-205ENST00000497015 ATAT1Q5SQI0 421 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms