RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 ATP13A4Q4VNC1 1196 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 KIAA1841Q6NSI8 718 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 UNQ6494/PRO21346Q6UXR6 183 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 USP30Q70CQ3 517 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 STRA8Q7Z7C7 330 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 NEIL1Q96FI4 390 aaPredicted RBP6.85□□□□□ -1.31
SNX13-211ENST00000496855 LMF1Q96S06 567 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 TTC1Q99614 292 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 SEMA4AQ9H3S1 761 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 MSRAQ9UJ68 235 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 VWA7Q9Y334 891 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 NR2E1Q9Y466 385 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 PRRG2O14669 202 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 GPR42O15529 346 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 ARHGAP6O43182 974 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 DDB1Q16531 1140 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 BROXQ5VW32 411 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 KRT26Q7Z3Y9 468 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 BMP8AQ7Z5Y6 402 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 CIR1Q86X95 450 aaPredicted RBP6.85□□□□□ -1.31
SNX13-211ENST00000496855 SLC5A5Q92911 643 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 LRRC37BQ96QE4 947 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 PITHD1Q9GZP4 211 aaPredicted RBP6.85□□□□□ -1.31
SNX13-211ENST00000496855 TMX1Q9H3N1 280 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 MS4A5Q9H3V2 200 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 FAM184BQ9ULE4 1060 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 NCANO14594 1321 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 ELL2O00472 640 aaPredicted RBP6.84□□□□□ -1.31
SNX13-211ENST00000496855 MAFGO15525 162 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 ID4P47928 161 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 CT47A1Q5JQC4 288 aaPredicted RBP6.84□□□□□ -1.31
SNX13-211ENST00000496855 KLHDC10Q6PID8 442 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 ESPNLQ6ZVH7 1005 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 AFAP1L2Q8N4X5 818 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 SAMD11Q96NU1 681 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 HAPLN2Q9GZV7 340 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 MTG2Q9H4K7 406 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 DENND2AQ9ULE3 1009 aa6.84□□□□□ -1.31
SNX13-211ENST00000496855 CADPSQ9ULU8 1353 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 A0A0A6YYJ9 748 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 LCHNA4D1U4 455 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 SESN2P58004 480 aaPredicted RBP6.83□□□□□ -1.32
SNX13-211ENST00000496855 EFEMP1Q12805 493 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 FRMD7Q6ZUT3 714 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 DYDC2Q96IM9 177 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 GNRHR2Q96P88 292 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 OAZ3Q9UMX2 235 aa6.83□□□□□ -1.32
SNX13-211ENST00000496855 APOBEC2Q9Y235 224 aaKnown RBP6.83□□□□□ -1.32
SNX13-211ENST00000496855 CTDP1Q9Y5B0 961 aaPredicted RBP6.83□□□□□ -1.32
SNX13-211ENST00000496855 MATN2O00339 956 aa6.82□□□□□ -1.32
SNX13-211ENST00000496855 PPM1GO15355 546 aaPredicted RBP6.82□□□□□ -1.32
SNX13-211ENST00000496855 RAB11FIP3O75154 756 aa6.82□□□□□ -1.32
SNX13-211ENST00000496855 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
SNX13-211ENST00000496855 CR2P20023 1033 aa6.82□□□□□ -1.32
SNX13-211ENST00000496855 HGFACQ04756 655 aa6.82□□□□□ -1.32
SNX13-211ENST00000496855 ADAM15Q13444 863 aa6.82□□□□□ -1.32
SNX13-211ENST00000496855 CFHR4Q92496 578 aa6.82□□□□□ -1.32
SNX13-211ENST00000496855 NKD2Q969F2 451 aaPredicted RBP6.82□□□□□ -1.32
SNX13-211ENST00000496855 GFM2Q969S9 779 aaKnown RBP6.82□□□□□ -1.32
SNX13-211ENST00000496855 LOXL4Q96JB6 756 aa6.82□□□□□ -1.32
SNX13-211ENST00000496855 POLR3BQ9NW08 1133 aaPredicted RBP6.82□□□□□ -1.32
SNX13-211ENST00000496855 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
SNX13-211ENST00000496855 TTBK1Q5TCY1 1321 aaPredicted RBP6.81□□□□□ -1.32
SNX13-211ENST00000496855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.81□□□□□ -1.32
SNX13-211ENST00000496855 KDM1AO60341 852 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 BRINP1O60477 761 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 OPHN1O60890 802 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 ULK1O75385 1050 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 CNGA1P29973 690 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 ZBTB41Q5SVQ8 909 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 TAX1BP1Q86VP1 789 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 RASSF3Q86WH2 238 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 TTC9BQ8N6N2 239 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 DNERQ8NFT8 737 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 OR14K1Q8NGZ2 314 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 LPPQ93052 612 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 FERMT2Q96AC1 680 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 WDR92Q96MX6 357 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 DPYSL5Q9BPU6 564 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 SMPD4Q9NXE4 827 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 SYNPO2Q9UMS6 1093 aa6.81□□□□□ -1.32
SNX13-211ENST00000496855 NOC2LQ9Y3T9 749 aaKnown RBP6.81□□□□□ -1.32
SNX13-211ENST00000496855 MYPNQ86TC9 1320 aa6.8□□□□□ -1.32
SNX13-211ENST00000496855 ST20-MTHFSA0A0A6YYL1 179 aa6.8□□□□□ -1.32
SNX13-211ENST00000496855 PCDH8O95206 1070 aa6.8□□□□□ -1.32
SNX13-211ENST00000496855 SPATS1Q496A3 300 aa6.8□□□□□ -1.32
SNX13-211ENST00000496855 TCTN3Q6NUS6 607 aa6.8□□□□□ -1.32
SNX13-211ENST00000496855 HDGFL2Q7Z4V5 671 aaPredicted RBP6.8□□□□□ -1.32
SNX13-211ENST00000496855 PRRT2Q7Z6L0 340 aaPredicted RBP6.8□□□□□ -1.32
SNX13-211ENST00000496855 CXorf67Q86X51 503 aaPredicted RBP6.8□□□□□ -1.32
SNX13-211ENST00000496855 GIMAP8Q8ND71 665 aaPredicted RBP6.8□□□□□ -1.32
SNX13-211ENST00000496855 NOL10Q9BSC4 688 aaKnown RBP6.8□□□□□ -1.32
SNX13-211ENST00000496855 C12orf65Q9H3J6 166 aaKnown RBP6.8□□□□□ -1.32
SNX13-211ENST00000496855 MSL2Q9HCI7 577 aa6.8□□□□□ -1.32
SNX13-211ENST00000496855 DNAI1Q9UI46 699 aa6.8□□□□□ -1.32
SNX13-211ENST00000496855 PRSS38A1L453 326 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 PATE3B3GLJ2 98 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 CDC14BO60729 498 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 EYA4O95677 639 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 PFKMP08237 780 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms