RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 DYDC2Q96IM9 177 aa21.9■■□□□ 1.1
COL20A1-208ENST00000496810 SCLT1Q96NL6 688 aa21.9■■□□□ 1.1
COL20A1-208ENST00000496810 MAFO75444 373 aaPredicted RBP21.89■■□□□ 1.09
COL20A1-208ENST00000496810 FGFR1P11362 822 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 BMP1P13497 986 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 DARSP14868 501 aaKnown RBP21.89■■□□□ 1.09
COL20A1-208ENST00000496810 RBM25P49756 843 aaKnown RBP21.89■■□□□ 1.09
COL20A1-208ENST00000496810 TRIM29Q14134 588 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 CTTNQ14247 550 aaKnown RBP21.89■■□□□ 1.09
COL20A1-208ENST00000496810 NLRP7Q8WX94 980 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 NAP1L4Q99733 375 aaKnown RBP21.89■■□□□ 1.09
COL20A1-208ENST00000496810 TMEM60Q9H2L4 133 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 CYP26B1Q9NR63 512 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 RNF19AQ9NV58 838 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 LRFN2Q9ULH4 789 aa21.89■■□□□ 1.09
COL20A1-208ENST00000496810 MARCH6O60337 910 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 P4HBP07237 508 aaKnown RBP21.88■■□□□ 1.09
COL20A1-208ENST00000496810 STAG3L1P0CL83 205 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 EPHA7Q15375 998 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 CALCRLQ16602 461 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 TCEAL5Q5H9L2 206 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 SLC24A5Q71RS6 500 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 HLA-CQ95604 372 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 ALG13Q9NP73 1137 aaKnown RBP21.88■■□□□ 1.09
COL20A1-208ENST00000496810 C1orf112Q9NSG2 853 aa21.88■■□□□ 1.09
COL20A1-208ENST00000496810 A0A087WZ62 844 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 NEMFO60524 1076 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 CD2BP2O95400 341 aaKnown RBP21.87■■□□□ 1.09
COL20A1-208ENST00000496810 ATP2B1P20020 1258 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 DNAJB1P25685 340 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 CAMK1Q14012 370 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 SLFN12Q8IYM2 578 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 SYMPKQ92797 1274 aaKnown RBP21.87■■□□□ 1.09
COL20A1-208ENST00000496810 C8orf76Q96K31 380 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 FDXACB1Q9BRP7 624 aaPredicted RBP21.87■■□□□ 1.09
COL20A1-208ENST00000496810 C11orf84Q9BUA3 381 aaPredicted RBP21.87■■□□□ 1.09
COL20A1-208ENST00000496810 UBE2ZQ9H832 354 aaPredicted RBP21.87■■□□□ 1.09
COL20A1-208ENST00000496810 SUCLA2Q9P2R7 463 aaPredicted RBP21.87■■□□□ 1.09
COL20A1-208ENST00000496810 COG5Q9UP83 839 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 PCDHB7Q9Y5E2 793 aa21.87■■□□□ 1.09
COL20A1-208ENST00000496810 POTEMA6NI47 508 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 TBKBP1A7MCY6 615 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 YWHABP31946 246 aaKnown RBP21.86■■□□□ 1.09
COL20A1-208ENST00000496810 PTPROQ16827 1216 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 TIGD5Q53EQ6 642 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 RHPN2Q8IUC4 686 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 CEP170P1Q96L14 293 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 NLRP4Q96MN2 994 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 MTMR9Q96QG7 549 aa21.86■■□□□ 1.09
COL20A1-208ENST00000496810 UHRF1Q96T88 793 aaPredicted RBP21.86■■□□□ 1.09
COL20A1-208ENST00000496810 LLPHQ9BRT6 129 aaKnown RBP21.86■■□□□ 1.09
COL20A1-208ENST00000496810 ITGB1P05556 798 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 RB1P06400 928 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 ATF7P17544 494 aaPredicted RBP21.85■■□□□ 1.09
COL20A1-208ENST00000496810 MCM7P33993 719 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 TXKP42681 527 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 FAM189BP81408 668 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 ODR4Q5SWX8 454 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 C4orf19Q8IY42 314 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 KLHL23Q8NBE8 558 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 TMEM143Q96AN5 459 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 EIF2AK1Q9BQI3 630 aaKnown RBP21.85■■□□□ 1.09
COL20A1-208ENST00000496810 DHX33Q9H6R0 707 aaKnown RBP21.85■■□□□ 1.09
COL20A1-208ENST00000496810 TTC12Q9H892 705 aaPredicted RBP21.85■■□□□ 1.09
COL20A1-208ENST00000496810 TMEM161AQ9NX61 479 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 PLAGL2Q9UPG8 496 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 RWDD3Q9Y3V2 267 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 PCDHGC5Q9Y5F6 944 aa21.85■■□□□ 1.09
COL20A1-208ENST00000496810 A0A087WWV3 80 aa21.84■■□□□ 1.09
COL20A1-208ENST00000496810 SLITRK3O94933 977 aa21.84■■□□□ 1.09
COL20A1-208ENST00000496810 BAG4O95429 457 aaKnown RBP21.84■■□□□ 1.09
COL20A1-208ENST00000496810 KCNA5P22460 613 aa21.84■■□□□ 1.09
COL20A1-208ENST00000496810 POLGP54098 1239 aaPredicted RBP21.84■■□□□ 1.09
COL20A1-208ENST00000496810 EMC2Q15006 297 aa21.84■■□□□ 1.09
COL20A1-208ENST00000496810 TPH2Q8IWU9 490 aa21.84■■□□□ 1.09
COL20A1-208ENST00000496810 ZSCAN31Q96LW9 406 aaPredicted RBP21.84■■□□□ 1.09
COL20A1-208ENST00000496810 NSUN3Q9H649 340 aaKnown RBP21.84■■□□□ 1.09
COL20A1-208ENST00000496810 SH2B1Q9NRF2 756 aaPredicted RBP21.84■■□□□ 1.09
COL20A1-208ENST00000496810 PCDHA12Q9UN75 941 aa21.84■■□□□ 1.09
COL20A1-208ENST00000496810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.83■■□□□ 1.09
COL20A1-208ENST00000496810 GTF2F1P35269 517 aaKnown RBP eCLIP21.83■■□□□ 1.09
COL20A1-208ENST00000496810 IRS1P35568 1242 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 NBR1Q14596 966 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 CLLU1OSQ5K130 101 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 ECHDC2Q86YB7 292 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 RNF169Q8NCN4 708 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 IL27Q8NEV9 243 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 FBXO18Q8NFZ0 1043 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 HSD17B14Q9BPX1 270 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 PLVAPQ9BX97 442 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 GCOM2Q9BZD3 368 aaPredicted RBP21.83■■□□□ 1.09
COL20A1-208ENST00000496810 ZSWIM4Q9H7M6 989 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 ATP6V0A4Q9HBG4 840 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 IFT122Q9HBG6 1241 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 XPNPEP1Q9NQW7 623 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 COL4A3BPQ9Y5P4 624 aa21.83■■□□□ 1.09
COL20A1-208ENST00000496810 DNM2P50570 870 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 RABEP1Q15276 862 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 SAFBQ15424 915 aaKnown RBP eCLIP21.82■■□□□ 1.08
COL20A1-208ENST00000496810 AAK1Q2M2I8 961 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms