RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 DENND3A2RUS2 1198 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 POTEMA6NI47 508 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 DARSP14868 501 aaKnown RBP16.2■□□□□ 0.18
PDAP1-204ENST00000496335 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.18
PDAP1-204ENST00000496335 GATMP50440 423 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 XKR9Q5GH70 373 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 TTC38Q5R3I4 469 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 NPAS4Q8IUM7 802 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 KSR1Q8IVT5 923 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 TMEM192Q8IY95 271 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 ZNF689Q96CS4 500 aaPredicted RBP16.2■□□□□ 0.18
PDAP1-204ENST00000496335 RGS18Q9NS28 235 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 CUL9Q8IWT3 2517 aa16.2■□□□□ 0.18
PDAP1-204ENST00000496335 BRWD1Q9NSI6 2320 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 RALGAPA2Q2PPJ7 1873 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 A0A087WZ62 844 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 C9IYK1 514 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 LINC00271P0C7V0 271 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 STAG3L1P0CL83 205 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 GJB2P29033 226 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
PDAP1-204ENST00000496335 MCM2P49736 904 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
PDAP1-204ENST00000496335 POLGP54098 1239 aaPredicted RBP16.19■□□□□ 0.18
PDAP1-204ENST00000496335 BTG3Q14201 252 aaPredicted RBP16.19■□□□□ 0.18
PDAP1-204ENST00000496335 DSC3Q14574 896 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 SLC24A5Q71RS6 500 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 OTUD6AQ7L8S5 288 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 RHPN2Q8IUC4 686 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 SLC7A3Q8WY07 619 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 JPH2Q9BR39 696 aaPredicted RBP16.19■□□□□ 0.18
PDAP1-204ENST00000496335 FDXACB1Q9BRP7 624 aaPredicted RBP16.19■□□□□ 0.18
PDAP1-204ENST00000496335 DHX33Q9H6R0 707 aaKnown RBP16.19■□□□□ 0.18
PDAP1-204ENST00000496335 LRFN2Q9ULH4 789 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
PDAP1-204ENST00000496335 FNDC1Q4ZHG4 1894 aaPredicted RBP16.18■□□□□ 0.18
PDAP1-204ENST00000496335 KIAA1671Q9BY89 1806 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 OR52Z1P0C646 297 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 TECP42680 631 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 PAN2Q504Q3 1202 aaKnown RBP16.18■□□□□ 0.18
PDAP1-204ENST00000496335 MCTP1Q6DN14 999 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 C4orf32Q8N8J7 132 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 NLRP4Q96MN2 994 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 SAMD11Q96NU1 681 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
PDAP1-204ENST00000496335 C1orf112Q9NSG2 853 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 NOL7Q9UMY1 257 aaKnown RBP16.18■□□□□ 0.18
PDAP1-204ENST00000496335 KIF3AQ9Y496 699 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 PCDHB7Q9Y5E2 793 aa16.18■□□□□ 0.18
PDAP1-204ENST00000496335 LYPLA2O95372 231 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 SPATA31C1P0DKV0 1188 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 CTNNB1P35222 781 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 RFC5P40937 340 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 TRAPPC10P48553 1259 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 FAM189BP81408 668 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 GPM6BQ13491 265 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 EMC2Q15006 297 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 SKIV2LQ15477 1246 aaKnown RBP16.17■□□□□ 0.18
PDAP1-204ENST00000496335 FAM102BQ5T8I3 360 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 NEK9Q8TD19 979 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 PIGOQ8TEQ8 1089 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
PDAP1-204ENST00000496335 SMC3Q9UQE7 1217 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 PPME1Q9Y570 386 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 PCDHB6Q9Y5E3 794 aa16.17■□□□□ 0.18
PDAP1-204ENST00000496335 MRPL42Q9Y6G3 142 aaKnown RBP16.17■□□□□ 0.18
PDAP1-204ENST00000496335 VCANP13611 3396 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 H3BNC9 293 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 MED24O75448 989 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
PDAP1-204ENST00000496335 BMPR1AP36894 532 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 CDC42EP1Q00587 391 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 ORC2Q13416 577 aaPredicted RBP16.16■□□□□ 0.18
PDAP1-204ENST00000496335 FAM43BQ6ZT52 329 aaPredicted RBP16.16■□□□□ 0.18
PDAP1-204ENST00000496335 CATSPER3Q86XQ3 398 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 EXOC8Q8IYI6 725 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 CMTR2Q8IYT2 770 aaKnown RBP16.16■□□□□ 0.18
PDAP1-204ENST00000496335 CLP1Q92989 425 aaKnown RBP16.16■□□□□ 0.18
PDAP1-204ENST00000496335 XPNPEP1Q9NQW7 623 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 COL4A3BPQ9Y5P4 624 aa16.16■□□□□ 0.18
PDAP1-204ENST00000496335 SRGAP2CP0DJJ0 459 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 FGFR1P11362 822 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 LAMTOR4Q0VGL1 99 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 PTGDRQ13258 359 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 ZNF410Q86VK4 478 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 PSPC1Q8WXF1 523 aaKnown RBP16.15■□□□□ 0.18
PDAP1-204ENST00000496335 MTRQ99707 1265 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 ATP6V0A4Q9HBG4 840 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 IFT122Q9HBG6 1241 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 ANKEF1Q9NU02 776 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 TMEM161AQ9NX61 479 aa16.15■□□□□ 0.18
PDAP1-204ENST00000496335 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
PDAP1-204ENST00000496335 ATG2AQ2TAZ0 1938 aa16.14■□□□□ 0.17
PDAP1-204ENST00000496335 TBKBP1A7MCY6 615 aa16.14■□□□□ 0.17
PDAP1-204ENST00000496335 C5orf67F2Z3F1 127 aa16.14■□□□□ 0.17
PDAP1-204ENST00000496335 H3BQV1 296 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms