RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CES2O00748 559 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 PPP1R37O75864 691 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 NOP2P46087 812 aaKnown RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 BAG6P46379 1132 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 QARSP47897 775 aaKnown RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 COG2Q14746 738 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 LMBR1Q8WVP7 490 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 STRA6Q9BX79 667 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 TCEAL9Q9UHQ7 104 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 HPCAL4Q9UM19 191 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 ERICH4A6NGS2 130 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 LYPLA2O95372 231 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 H2AFZP0C0S5 128 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 FDX1P10109 184 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 KRT13P13646 458 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 RFX1P22670 979 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 TNFRSF8P28908 595 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 SOX5P35711 763 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 TGFB2P61812 414 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 CETN1Q12798 172 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 BFSP1Q12934 665 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 MAPK7Q13164 816 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 RPS6KA1Q15418 735 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 H2AFVQ71UI9 128 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 SYTL5Q8TDW5 730 aaPredicted RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 PKNOX2Q96KN3 472 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 TIPINQ9BVW5 301 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 IKZF4Q9H2S9 585 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 RAVER2Q9HCJ3 691 aaKnown RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 HOMER2Q9NSB8 354 aa12.07□□□□□ -0.48
CMSS1-208ENST00000496116 RBM12Q9NTZ6 932 aaKnown RBP12.07□□□□□ -0.48
CMSS1-208ENST00000496116 A0A0A6YYK5 440 aaPredicted RBP12.06□□□□□ -0.48
CMSS1-208ENST00000496116 F8VZ95 297 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 EVI5O60447 810 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 N4BP1O75113 896 aaKnown RBP12.06□□□□□ -0.48
CMSS1-208ENST00000496116 ZBED4O75132 1171 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 MYBL2P10244 700 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 LMNB1P20700 586 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 RARRES1P49788 294 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 EPHB4P54760 987 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 MYL7Q01449 175 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 GJB7Q6PEY0 223 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 INTS8Q75QN2 995 aaKnown RBP12.06□□□□□ -0.48
CMSS1-208ENST00000496116 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 DAW1Q8N136 415 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 GOLGA6L1Q8N7Z2 621 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 MS4A14Q96JA4 679 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 ACCSQ96QU6 501 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 EHD2Q9NZN4 543 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 APEX2Q9UBZ4 518 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 DMGDHQ9UI17 866 aaKnown RBP12.06□□□□□ -0.48
CMSS1-208ENST00000496116 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 PPP1R9AQ9ULJ8 1098 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 FAN1Q9Y2M0 1017 aa12.06□□□□□ -0.48
CMSS1-208ENST00000496116 PLS3P13797 630 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 YWHABP31946 246 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 DNA2P51530 1060 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 ZNF280AP59817 542 aaPredicted RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 MRPS9P82933 396 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 ITGB3BPQ13352 177 aaPredicted RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 DRAP1Q14919 205 aaPredicted RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 PGM5Q15124 567 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 CBWD6Q4V339 395 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 DALRD3Q5D0E6 543 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 CBWD3Q5JTY5 395 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 CBWD5Q5RIA9 395 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 TAF3Q5VWG9 929 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 EMBQ6PCB8 327 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 MAEAQ7L5Y9 396 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 IFT20Q8IY31 132 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 GSPT2Q8IYD1 628 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 SLC17A8Q8NDX2 589 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 HDAC7Q8WUI4 952 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 TMEM174Q8WUU8 243 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 PBKQ96KB5 322 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 IWS1Q96ST2 819 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 AJAP1Q9UKB5 411 aaPredicted RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 NENFQ9UMX5 172 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 FER1L6Q2WGJ9 1857 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 KIF4AO95239 1232 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 VCAM1P19320 739 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 SFNP31947 248 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 JAK3P52333 1124 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 GYS2P54840 703 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 NPEPPSP55786 919 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 SNRPFP62306 86 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 TNNC1P63316 161 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 SLC7A5Q01650 507 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 PLS1Q14651 629 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 MUM1L1Q5H9M0 696 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 RNF207Q6ZRF8 634 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 VTI1AQ96AJ9 217 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms