RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 COL4A3BPQ9Y5P4 624 aa22.33■■□□□ 1.17
COL9A2-210ENST00000495948 MORC2Q9Y6X9 1032 aaPredicted RBP22.33■■□□□ 1.17
COL9A2-210ENST00000495948 PP2D1A8MPX8 630 aa22.32■■□□□ 1.16
COL9A2-210ENST00000495948 GPR182O15218 404 aa22.32■■□□□ 1.16
COL9A2-210ENST00000495948 DARSP14868 501 aaKnown RBP22.32■■□□□ 1.16
COL9A2-210ENST00000495948 EIF4BP23588 611 aaKnown RBP22.32■■□□□ 1.16
COL9A2-210ENST00000495948 RABGGTBP53611 331 aa22.32■■□□□ 1.16
COL9A2-210ENST00000495948 ECM1Q16610 540 aa22.32■■□□□ 1.16
COL9A2-210ENST00000495948 RHPN2Q8IUC4 686 aa22.32■■□□□ 1.16
COL9A2-210ENST00000495948 LINC01599Q8WXQ3 324 aa22.32■■□□□ 1.16
COL9A2-210ENST00000495948 YBX2Q9Y2T7 364 aaKnown RBP22.32■■□□□ 1.16
COL9A2-210ENST00000495948 USO1O60763 962 aaKnown RBP22.31■■□□□ 1.16
COL9A2-210ENST00000495948 PTPAQ15257 358 aa22.31■■□□□ 1.16
COL9A2-210ENST00000495948 HYIQ5T013 277 aa22.31■■□□□ 1.16
COL9A2-210ENST00000495948 FAM173BQ6P4H8 233 aa22.31■■□□□ 1.16
COL9A2-210ENST00000495948 MMTAG2Q9BU76 263 aaKnown RBP22.31■■□□□ 1.16
COL9A2-210ENST00000495948 GCOM2Q9BZD3 368 aaPredicted RBP22.31■■□□□ 1.16
COL9A2-210ENST00000495948 TSPYL2Q9H2G4 693 aaPredicted RBP22.31■■□□□ 1.16
COL9A2-210ENST00000495948 SLC26A4O43511 780 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 TLL1O43897 1013 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 ZSCAN22P10073 491 aaPredicted RBP22.3■■□□□ 1.16
COL9A2-210ENST00000495948 KCTD17Q8N5Z5 321 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 DEFB123Q8N688 67 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 MCPH1Q8NEM0 835 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 TOP1MTQ969P6 601 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 TMEM143Q96AN5 459 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 NLRP4Q96MN2 994 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 NKX2-4Q9H2Z4 354 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 TTYH1Q9H313 450 aaPredicted RBP22.3■■□□□ 1.16
COL9A2-210ENST00000495948 TMX1Q9H3N1 280 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 DDX19AQ9NUU7 478 aaKnown RBP22.3■■□□□ 1.16
COL9A2-210ENST00000495948 ST3GAL5Q9UNP4 418 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 KIAA1024Q9UPX6 916 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 CLIC4Q9Y696 253 aa22.3■■□□□ 1.16
COL9A2-210ENST00000495948 A0A087WZ62 844 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 ARHGEF35A5YM69 484 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 ASAP2O43150 1006 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 LONP1P36776 959 aaKnown RBP22.29■■□□□ 1.16
COL9A2-210ENST00000495948 LAMTOR4Q0VGL1 99 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 NFX1Q12986 1120 aaKnown RBP22.29■■□□□ 1.16
COL9A2-210ENST00000495948 BECN1Q14457 450 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 MXD4Q14582 209 aaPredicted RBP22.29■■□□□ 1.16
COL9A2-210ENST00000495948 Q7L0L9 218 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 TMCO2Q7Z6W1 182 aaPredicted RBP22.29■■□□□ 1.16
COL9A2-210ENST00000495948 SPRYD3Q8NCJ5 442 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 ZNF668Q96K58 619 aaPredicted RBP22.29■■□□□ 1.16
COL9A2-210ENST00000495948 USP28Q96RU2 1077 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 FDXACB1Q9BRP7 624 aaPredicted RBP22.29■■□□□ 1.16
COL9A2-210ENST00000495948 INO80BQ9C086 356 aaPredicted RBP22.29■■□□□ 1.16
COL9A2-210ENST00000495948 NT5C3AQ9H0P0 336 aa22.29■■□□□ 1.16
COL9A2-210ENST00000495948 ENPP3O14638 875 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 F13A1P00488 732 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 CA3P07451 260 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 SFPQP23246 707 aaKnown RBP eCLIP22.28■■□□□ 1.16
COL9A2-210ENST00000495948 CDC25AP30304 524 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 NASPP49321 788 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-210ENST00000495948 HTRA4P83105 476 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-210ENST00000495948 PPP2R2DQ66LE6 453 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 PRPF31Q8WWY3 499 aaKnown RBP22.28■■□□□ 1.16
COL9A2-210ENST00000495948 RAD9AQ99638 391 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 ZBED2Q9BTP6 218 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 BHMT2Q9H2M3 363 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 SLC28A3Q9HAS3 691 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 IFT122Q9HBG6 1241 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 C1orf112Q9NSG2 853 aa22.28■■□□□ 1.16
COL9A2-210ENST00000495948 MGEA5O60502 916 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 EYA4O95677 639 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 MYOGP15173 224 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 ARL2P36404 184 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 TTC3P53804 2025 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 KSR1Q8IVT5 923 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 POLR3FQ9H1D9 316 aaPredicted RBP22.27■■□□□ 1.16
COL9A2-210ENST00000495948 ZNF576Q9H609 170 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 INSL6Q9Y581 213 aa22.27■■□□□ 1.16
COL9A2-210ENST00000495948 A0A087WWV3 80 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 DENND3A2RUS2 1198 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 PHKA2P46019 1235 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 GRIN1Q05586 938 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 POU5F1BQ06416 359 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 PKP1Q13835 747 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 TFDP1Q14186 410 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 DSC3Q14574 896 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 TMEM119Q4V9L6 283 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 PADI6Q6TGC4 694 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 SRGAP1Q7Z6B7 1085 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 RTN4RL1Q86UN2 441 aaPredicted RBP22.26■■□□□ 1.15
COL9A2-210ENST00000495948 CABP7Q86V35 215 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 IFNLR1Q8IU57 520 aaPredicted RBP22.26■■□□□ 1.15
COL9A2-210ENST00000495948 NPAS4Q8IUM7 802 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 RNF149Q8NC42 400 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 SP7Q8TDD2 431 aaPredicted RBP22.26■■□□□ 1.15
COL9A2-210ENST00000495948 ZNF396Q96N95 335 aaPredicted RBP22.26■■□□□ 1.15
COL9A2-210ENST00000495948 SEMA6BQ9H3T3 888 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 RGS18Q9NS28 235 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 MTMR10Q9NXD2 777 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 FBXO2Q9UK22 296 aaPredicted RBP22.26■■□□□ 1.15
COL9A2-210ENST00000495948 DNM3Q9UQ16 869 aa22.26■■□□□ 1.15
COL9A2-210ENST00000495948 CDH23Q9H251 3354 aa22.25■■□□□ 1.15
COL9A2-210ENST00000495948 CYP11B2P19099 503 aa22.25■■□□□ 1.15
COL9A2-210ENST00000495948 SARSP49591 514 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms