RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 CLEC11AQ9Y240 323 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 FGD5Q6ZNL6 1462 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 BTN3A3O00478 584 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 ECE2O60344 883 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 SDSP20132 328 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 DR1Q01658 176 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 GRM1Q13255 1194 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 NCF4Q15080 339 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 TRADDQ15628 312 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 APOA5Q6Q788 366 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 PEG10Q86TG7 708 aaKnown RBP5.5□□□□□ -1.53
NF1-216ENST00000495910 USP44Q9H0E7 712 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 CACNA2D2Q9NY47 1150 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 SMIM31A0A1B0GVY4 71 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 AP3B1O00203 1094 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 RNF113AO15541 343 aaKnown RBP5.5□□□□□ -1.53
NF1-216ENST00000495910 USP1O94782 785 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 PIK3R1P27986 724 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 ARL3P36405 182 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 BTKQ06187 659 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 CALCRLQ16602 461 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 SYTL3Q4VX76 610 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 TTC33Q6PID6 262 aaPredicted RBP5.5□□□□□ -1.53
NF1-216ENST00000495910 TBC1D19Q8N5T2 526 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 ENKURQ8TC29 256 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 OTUD5Q96G74 571 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 ADPGKQ9BRR6 497 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 CCDC28BQ9BUN5 200 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 FOXP3Q9BZS1 431 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 ZNF304Q9HCX3 659 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 C8orf4Q9NR00 106 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 UBA2Q9UBT2 640 aaPredicted RBP5.5□□□□□ -1.53
NF1-216ENST00000495910 PLAAQ9Y263 795 aa5.5□□□□□ -1.53
NF1-216ENST00000495910 EPN1Q9Y6I3 576 aaPredicted RBP5.5□□□□□ -1.53
NF1-216ENST00000495910 ATP8B3O60423 1300 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 TLR3O15455 904 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 DYNC1LI2O43237 492 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 SRP72O76094 671 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 MYCLP12524 364 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 TMPOP42166 694 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 PIK3CAP42336 1068 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RARSP54136 660 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 SFSWAPQ12872 951 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 LRRC36Q1X8D7 754 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 PDZK1Q5T2W1 519 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 LAYNQ6UX15 382 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RDH13Q8NBN7 331 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 FAM162AQ96A26 154 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 FAM81BQ96LP2 452 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 KDM2BQ8NHM5 1336 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 PIK3R2O00459 728 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 ABCB1P08183 1280 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 CCND1P24385 295 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 STARP49675 285 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RCN1Q15293 331 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 SLC9C2Q5TAH2 1124 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 SFR1Q86XK3 245 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RNFT2Q96EX2 444 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 TEX13AQ9BXU3 409 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 MCM9Q9NXL9 1143 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 ARMCX3Q9UH62 379 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 KLHL3Q9UH77 587 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 GTF2A1LQ9UNN4 478 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 DDX39AO00148 427 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 MAGEA10P43363 369 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 ARL4CP56559 192 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RPS6P62753 249 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 USF2Q15853 346 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 NFIL3Q16649 462 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 EMBQ6PCB8 327 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 KIAA0408Q6ZU52 694 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 FAM47EQ6ZV65 393 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 NLRP14Q86W24 1093 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 DDIASQ8IXT1 998 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 AGGF1Q8N302 714 aaeCLIP5.49□□□□□ -1.53
NF1-216ENST00000495910 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 ZBTB10Q96DT7 871 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 APOL4Q9BPW4 351 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 GCOM2Q9BZD3 368 aaPredicted RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 WWP1Q9H0M0 922 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 EPN3Q9H201 632 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 COMMD9Q9P000 198 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 PITPNM2Q9BZ72 1349 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RASA4BC9J798 803 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RASA4O43374 803 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 HSPA2P54652 639 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RPL19P84098 196 aaKnown RBP5.49□□□□□ -1.53
NF1-216ENST00000495910 ZSWIM7Q19AV6 140 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 CREB3L3Q68CJ9 461 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 PLEKHA7Q6IQ23 1121 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 LRRC8AQ8IWT6 810 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 SLC35F6Q8N357 371 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RAB42Q8N4Z0 105 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 FAM133AQ8N9E0 248 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 RHPN1Q8TCX5 695 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 GANCQ8TET4 914 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 CATSPER2Q96P56 530 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 KCNK16Q96T55 309 aa5.49□□□□□ -1.53
NF1-216ENST00000495910 HINFPQ9BQA5 517 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms